Gene CFF8240_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_0665 
Symbolcas 
ID4538619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand+ 
Start bp672834 
End bp673802 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content30% 
IMG OID639746051 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_891840 
Protein GI118475338 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.100069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGC TGAGTCGCAA AGATAACTCT TTGGCTTTTA AAAATGAAAA AGGTACGACA 
TATATTCCTA TAGCCGGCAT AAGAGAAATT TATTGTATGA ATGAAGTTAG CATAAACTCA 
AAATTGCTTG ATTTTCTTGC CAAAAACGGA ATTACGATTC ATTTTTTTAA CTATTACGGG 
AATTATAGCG GTAGTTTTTA TCCTAAAAAG CATCTTATAA GCGGTCGAGT AATTATATCA 
CAAGTAGAAG CTCTTGCGAA TAGAATGATA GTAGCAAAAA GCATAGTAAA AGGCATCGCA 
TTAAATATGC ATGAGGTCTT ATATCACTAT TACAGGCATG GAAAAACAGA GCTTAAACCT 
CTTTTGGATT ATCTCAAATT TAGAGTTTCA AATATGCTGA TAAATGCAAA TACAATTCCT 
CAAATTATGT TTATAGAAGG TCAAATTTGG AGTAAATTTT ATGATAGTTT TGAGCTGTTT 
TTAGATGAGA GTTTTAGCTT AGGAAAACGT GTTAAACGCC CACCGGATAA TCCTATGAAC 
GCTATGATAA GTTTTGGCAA TTCGCTTCTT TATACAAAAA CTATAAGCGC AATTTATCAA 
ACTCATCTCG AACAAAGTAT TAGTTATCTG CACGAGAGTA GCGATGCTAG ATTTAGTCTT 
AGTCTGGATT TAAGCGAAGT TTTTAAGCCT ATTATCGTAT TTAAAACAGT ATTTGAGCTT 
GTAAATTTAA AAAAGATAAA TATCAAAAAA CATTTTGAAA AAAAGATAGA TTTTTGCCTA 
TTAAATGAAT CGGGACGGAA AATTTTTGTA GAAAGTTTTG AAGAGAGATT AAACGAACCG 
TTTTTACATT CTAAACTAAA TAGAAAGATT TCTTATAAAA CAGCTTTGAA ATTAGAAGGT 
TATAAGCTTA TTAAATTTAT ATGTGAATCT CGTGAATTTG TACCATTTAG TTTAAAAGAT 
AAGCGATGA
 
Protein sequence
MGELSRKDNS LAFKNEKGTT YIPIAGIREI YCMNEVSINS KLLDFLAKNG ITIHFFNYYG 
NYSGSFYPKK HLISGRVIIS QVEALANRMI VAKSIVKGIA LNMHEVLYHY YRHGKTELKP 
LLDYLKFRVS NMLINANTIP QIMFIEGQIW SKFYDSFELF LDESFSLGKR VKRPPDNPMN 
AMISFGNSLL YTKTISAIYQ THLEQSISYL HESSDARFSL SLDLSEVFKP IIVFKTVFEL 
VNLKKINIKK HFEKKIDFCL LNESGRKIFV ESFEERLNEP FLHSKLNRKI SYKTALKLEG 
YKLIKFICES REFVPFSLKD KR