Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0665 |
Symbol | cas |
ID | 4538619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 672834 |
End bp | 673802 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639746051 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_891840 |
Protein GI | 118475338 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.100069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAGC TGAGTCGCAA AGATAACTCT TTGGCTTTTA AAAATGAAAA AGGTACGACA TATATTCCTA TAGCCGGCAT AAGAGAAATT TATTGTATGA ATGAAGTTAG CATAAACTCA AAATTGCTTG ATTTTCTTGC CAAAAACGGA ATTACGATTC ATTTTTTTAA CTATTACGGG AATTATAGCG GTAGTTTTTA TCCTAAAAAG CATCTTATAA GCGGTCGAGT AATTATATCA CAAGTAGAAG CTCTTGCGAA TAGAATGATA GTAGCAAAAA GCATAGTAAA AGGCATCGCA TTAAATATGC ATGAGGTCTT ATATCACTAT TACAGGCATG GAAAAACAGA GCTTAAACCT CTTTTGGATT ATCTCAAATT TAGAGTTTCA AATATGCTGA TAAATGCAAA TACAATTCCT CAAATTATGT TTATAGAAGG TCAAATTTGG AGTAAATTTT ATGATAGTTT TGAGCTGTTT TTAGATGAGA GTTTTAGCTT AGGAAAACGT GTTAAACGCC CACCGGATAA TCCTATGAAC GCTATGATAA GTTTTGGCAA TTCGCTTCTT TATACAAAAA CTATAAGCGC AATTTATCAA ACTCATCTCG AACAAAGTAT TAGTTATCTG CACGAGAGTA GCGATGCTAG ATTTAGTCTT AGTCTGGATT TAAGCGAAGT TTTTAAGCCT ATTATCGTAT TTAAAACAGT ATTTGAGCTT GTAAATTTAA AAAAGATAAA TATCAAAAAA CATTTTGAAA AAAAGATAGA TTTTTGCCTA TTAAATGAAT CGGGACGGAA AATTTTTGTA GAAAGTTTTG AAGAGAGATT AAACGAACCG TTTTTACATT CTAAACTAAA TAGAAAGATT TCTTATAAAA CAGCTTTGAA ATTAGAAGGT TATAAGCTTA TTAAATTTAT ATGTGAATCT CGTGAATTTG TACCATTTAG TTTAAAAGAT AAGCGATGA
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Protein sequence | MGELSRKDNS LAFKNEKGTT YIPIAGIREI YCMNEVSINS KLLDFLAKNG ITIHFFNYYG NYSGSFYPKK HLISGRVIIS QVEALANRMI VAKSIVKGIA LNMHEVLYHY YRHGKTELKP LLDYLKFRVS NMLINANTIP QIMFIEGQIW SKFYDSFELF LDESFSLGKR VKRPPDNPMN AMISFGNSLL YTKTISAIYQ THLEQSISYL HESSDARFSL SLDLSEVFKP IIVFKTVFEL VNLKKINIKK HFEKKIDFCL LNESGRKIFV ESFEERLNEP FLHSKLNRKI SYKTALKLEG YKLIKFICES REFVPFSLKD KR
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