Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0633 |
Symbol | |
ID | 4537820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 644762 |
End bp | 646105 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639746019 |
Product | 3-deoxy-7-phosphoheptulonate synthase |
Protein accession | YP_891809 |
Protein GI | 118474480 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAGT GGAATAGAGA CAGCTGGAGA GATTATAATA TTTTGCAACA ACCGCATTAT CCGGATAAAA ATGAACTAAA AAATGCTGAA GATAAGCTAA AAAGTCTACC GCCGCTCGTT TTTGCTGGAG AGGTCAGAAA TTTAAAAGAT GAATTAAAAA ACGTTACGCT AGGAAAAAGC TTTTTGTTGC AAGGCGGAGA TTGTGCTGAA AGTTTCTCTA ATTTTAGTGC AAACGGTATA AGAGATATGT TTAAAATAAT GCTTCAAATG GCAATAGTAT TGACATTTGC CGGAGGCTGT CCTGTAGTCA AAGTAGGTCG CGTCGCAGGT CAATTTGCTA AGCCTAGAAG TAGCGATTTT GAAGATATCG ACGGAGTGAA ACTTCCAAGC TATAGAGGCG ATATTATAAA TGGTTTTGAT TTTACGGAAG AGGCTAGAAT ACCAGATCCA AAAAGAATGA TAGATGCTTA TTATCAAAGT GCTTCTACGC TAAATTTATT AAGAGCATTT TCGCGCGGAG GGCTTGCAAA TTTAAATGAA GTTCATAGAT GGAATCTTGG ATTTATAAAA AAAGCAGAAC TTGATAATAA GTTTGAAAAA TTAGCAGATG AACTTACCGG GGCGCTTAAA TTTATGGAAG CGTGCGGTGT GACGACTCAA AATACTCCGA CGCTTAGCGA AACAAAACTA TATACGTCTC ACGAGGCATT GCTTTTGCCT TATGAAGAGG CTTTAACTAG AGTAGATAGC CTTACGAATG AATGGTATGA TTGTTCGGCT CATATGCTTT GGATAGGTGA AAGAACACGC GGAATCAATG ATGCGCACGT GCATTTTTTA AGCGGTATAA AAAATCCGAT AGGGTGCAAA ATAGGACCTG ATGGCAAACC GGGCGATATC ATATCTTTAG CAGGGAAACT AAATCCAGAT AATGAACCAG GACGCCTAAA TATCATTATT AGAATGGGAG CAGATAAGAT AGAAGACAGA CTTCCTGCTA TATTGAACTA TGTAAAAAAA GAAGGACTTA ATATCCTTTG GAGCATAGAT CCTATGCATG GAAATACTAT AAAAGCTAGC AGTGGATTTA AAACACGTGA GTTTAATAAT GTTATGAGAG AGGTCAAGAG TTTCTTTGAA ATTCATAGAG CGTGCGGTAC AATAGCTGGC GGAGTACATC TTGAGATGAC CGGTCAAGAT GTAACAGAGT GTGTTGGAGG TGCGTTTAAC GTTACTGAAG ATTCATTAGG AAATAGGTAT GAAACTCAAT GCGATCCAAG GTTGAATGCG GATCAAGCCT TAGAGCTTGC ATTTTTGATA GCCGATTTAG TTAAAAAGCG CTAA
|
Protein sequence | MSKWNRDSWR DYNILQQPHY PDKNELKNAE DKLKSLPPLV FAGEVRNLKD ELKNVTLGKS FLLQGGDCAE SFSNFSANGI RDMFKIMLQM AIVLTFAGGC PVVKVGRVAG QFAKPRSSDF EDIDGVKLPS YRGDIINGFD FTEEARIPDP KRMIDAYYQS ASTLNLLRAF SRGGLANLNE VHRWNLGFIK KAELDNKFEK LADELTGALK FMEACGVTTQ NTPTLSETKL YTSHEALLLP YEEALTRVDS LTNEWYDCSA HMLWIGERTR GINDAHVHFL SGIKNPIGCK IGPDGKPGDI ISLAGKLNPD NEPGRLNIII RMGADKIEDR LPAILNYVKK EGLNILWSID PMHGNTIKAS SGFKTREFNN VMREVKSFFE IHRACGTIAG GVHLEMTGQD VTECVGGAFN VTEDSLGNRY ETQCDPRLNA DQALELAFLI ADLVKKR
|
| |