Gene CFF8240_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_0627 
SymboldapE 
ID4539071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand+ 
Start bp636725 
End bp637822 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content36% 
IMG OID639746013 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_891803 
Protein GI118474448 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.119075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTG TAGAAATTTT AAAAGAGCTT TTGAAATTTA AAAGCATTAC TCCAGATGAT 
GATGGTGCTA TGAATTTTAT AAATATGTTT ATGGATGGAT TTGATGCTGA TTTCGTTGAT 
GTAAATGGCA TAAAAAATCT TATTTTGACA AAGAAATTCG GAGATGGCGT TCATCTATGT 
TTCGCAGGTC ATATAGACGT AGTGCCTGCC GGAGACGGCT GGGATAGTGA TCCTTTTGAA 
CCTGAATTAA AAGATGGTTT TGTTTATGCA AGAGGCGCCC AAGATATGAA AAGCGGAGTA 
GCGGCTTTTT TATGCGCATG TAAAGACGCT ACTAAATTTA ACGGAACTCT TAGTATAATC 
CTTACTAGTG ATGAAGAGGG AGACGGTATT TATGGCACTC TAGAAGCCCT TAAATTTTTA 
AAAAGCAGAG GAAATTTACC GGACTTTGCT TTAGTTGCCG AGCCGACATC TTCAAGTACA 
TTTGGCGATA CTATAAAAAT CGGTCGAAGA GGCTCGGTAA ACGGGGTCGT AACAATAAAC 
GGAGTTCAAG GTCACGCGGC TTATCCTGAA AAATGCGTAA ATCCTGTACA TCAATTAGCT 
AGCGTTTTTT CTGATTTTGC AGGATATGAA CTTGATAGCG GCAGTAAGTA TTTTGGTGCT 
AGCAAGATTG TTATTACTGA TATTAGAGGA GGTATGGAGG TTGTAAATGT TACGCCAAAA 
AGCGTAAAAA TTATGTTTAA TGTAAGAAAC TCTGAATTAA CTAGTTGTGA AGATATAAAA 
AGATATACTG AGCATATTTT TAATGGATTT GATTTTACTT TAAGTCTAAA AGAGAGTTCA 
AAACCGTTTT TAACAGATGA AAGTTCAAAG ATAGTCATTC AGGCTCAAAA AAGCATTGAA 
AATATCTGCA AAATTTCACC TGATCTTAGT ACTAGCGGCG GTACTAGCGA TGCTAGATAT 
TTTGCGGCTT TTGGAGTTCC TGTTGTAGAG TTTGGAGTAG TGAATGATAG AATTCACGCC 
ATAAACGAGA GAGTTTTACA AAGCGAGGTG GAGTCTTTAT ATCTTGTATT TAAAGATTTA 
ATTGAGAATT TTGAGTAA
 
Protein sequence
MEVVEILKEL LKFKSITPDD DGAMNFINMF MDGFDADFVD VNGIKNLILT KKFGDGVHLC 
FAGHIDVVPA GDGWDSDPFE PELKDGFVYA RGAQDMKSGV AAFLCACKDA TKFNGTLSII 
LTSDEEGDGI YGTLEALKFL KSRGNLPDFA LVAEPTSSST FGDTIKIGRR GSVNGVVTIN 
GVQGHAAYPE KCVNPVHQLA SVFSDFAGYE LDSGSKYFGA SKIVITDIRG GMEVVNVTPK 
SVKIMFNVRN SELTSCEDIK RYTEHIFNGF DFTLSLKESS KPFLTDESSK IVIQAQKSIE 
NICKISPDLS TSGGTSDARY FAAFGVPVVE FGVVNDRIHA INERVLQSEV ESLYLVFKDL 
IENFE