Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0615 |
Symbol | |
ID | 4538931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 624277 |
End bp | 625083 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639746001 |
Product | carbon-nitrogen family hydrolase |
Protein accession | YP_891791 |
Protein GI | 118474909 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00206547 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAA TATGCGTGCT TCAGCTAAAT ACTCTTGCCA TGAGCGACTC TAGGATAGAT TACTATTTAA AGTTGGCTAA AGAGCGCGGT GCAGGACTAG TGCTGATCGG TGAGTATGTT TTGAACTCAT TTTTTACCGA AATAATCAAA ATGCCTAAAT CCATGATAAA AGAGCAGAGC GAACACAAAA GAGCTTCTCT TTTAAATTTA GCAAAAAAAT ACGATCTCAT CATAGTTGCT CCGATTATTC TTTTAAAAGG TAAAGATATA TATAAAGTTG TAGCTAAATT TAGCCCTCAA AGCGTGAAGT ACGAAGAGCA AAATATTTTT ATAGATTATT CTCATTGGAA TGAAAGTAAA TTTTTTAAAA GCAGTAAAAA AGATAGTTTG GGTATTATGA GTTTTGCTTA CGATAAGTTC AAATTTGGAG TTATGTTTGG TTATGAAACA CACTTTGATA GGCTTTGGCA AGAGATGATG TCTAAGAAGA TCGATTGCGT GCTTGTGCCT ACTGCTTGCA CTTTAAACTC AAAAGACAGA TGGAACGAGC TGTTAAAAAT GAGAGCTTTT ACGAATAACG TATATATTTT AAGGGCAAAT AGACTTGGTA AGGCTAAATT TGATGAGGTT AGTTCAGAGT TTTATGGAAA CTCTATGCTA ATTAGTCCGC ACGGAGAGAT CATGGATAGT CTTGATACGA ATGAAGGAAT GTTGGTTTGC GAATTAGATA AAAAACTCTT AAATGAAGCT AGGAGTATTT GGAAATTTAG TCAAAAATCC AGCTATTTAC AAGAATTTAA GGGATAA
|
Protein sequence | MAKICVLQLN TLAMSDSRID YYLKLAKERG AGLVLIGEYV LNSFFTEIIK MPKSMIKEQS EHKRASLLNL AKKYDLIIVA PIILLKGKDI YKVVAKFSPQ SVKYEEQNIF IDYSHWNESK FFKSSKKDSL GIMSFAYDKF KFGVMFGYET HFDRLWQEMM SKKIDCVLVP TACTLNSKDR WNELLKMRAF TNNVYILRAN RLGKAKFDEV SSEFYGNSML ISPHGEIMDS LDTNEGMLVC ELDKKLLNEA RSIWKFSQKS SYLQEFKG
|
| |