Gene CFF8240_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_0563 
Symbol 
ID4538745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand
Start bp570443 
End bp571354 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content35% 
IMG OID639745950 
ProductD-alanine aminotransferase 
Protein accessionYP_891753 
Protein GI118475712 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.63446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TACTCGAAAT TTTAATAGGA GTAGATATTA TGGCGGCAGG TGACGCAGAA 
AACATCGTAT ATTTAAATGG GGAATTTTTA AATAAAAACG ATGCTAAGAT CAGCATATTT
GATCGTGGTT TTATATTTGG AGACGGAATT TATGAAGTAG TTCCTATAAT AAACTCAAAG
CTAGTCGATA AAGAAGATTT TTGGGATAGA TTTCAAAGAA GCCTTAAAGC AATCGAGCTT
GAGCTGCCTA TAGATAAAGA TGAATTTGAA AAGATACTTT ACGCATTGAT AGAAAAAAAC
AGCGTGAAAG AAGGCGGTAT CTATATGGAA GTTACAAGAG GCGTGAGCGA ACGTGAGTTT
AAATTTATAA AAGGACTAAA ACCTACTGTG ATGGCGTTCG TTTATCAAAA AGAGATATTT
AACAATGAAT ATGCCAAAAC AGGAATAGAA ATAATAAGCA CTCCTGATAT CAGATGGAAA
AGACGAGATA TAAAATCAAT ATCTCTCCTA GCTCAATGTT ATGCAAAGAA TGAAGCGTAT
AAAGTAGGTG CTTATGAGTC TTTTATGGTA GAAGATGGAT TTGTAACAGA AGCAAGTAGT
AGCAGCGCAT TTATAATAAA AGACGATACC CTTATCACTA AACCTCTTTC CAATGAGATC
TTGCCCGGAA TAAGACGAAA AGTTTTGCTA GCACTAGCAA ACAAAGCCGG ACTTAGAGTA
GAACAAAGAA AATTTACTAT GGATGAAGTT TATAATGCCG ATGAAGTATT TATCAGCGCT
GCCACTTTGA TACTTCTACC TGTTATAAAA GCCGACGGAA AACCAATAAA CAACGCAAAG
ATAGGAAAAT ACTCACCAAA ACTGCGTGAA TTATATATAG AGCGTTTGAA AAAAGAAGCC
GGACTAATGT AG
 
Protein sequence
MDKILEILIG VDIMAAGDAE NIVYLNGEFL NKNDAKISIF DRGFIFGDGI YEVVPIINSK 
LVDKEDFWDR FQRSLKAIEL ELPIDKDEFE KILYALIEKN SVKEGGIYME VTRGVSEREF
KFIKGLKPTV MAFVYQKEIF NNEYAKTGIE IISTPDIRWK RRDIKSISLL AQCYAKNEAY
KVGAYESFMV EDGFVTEASS SSAFIIKDDT LITKPLSNEI LPGIRRKVLL ALANKAGLRV
EQRKFTMDEV YNADEVFISA ATLILLPVIK ADGKPINNAK IGKYSPKLRE LYIERLKKEA
GLM