| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0521 |
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| Symbol | |
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| ID | 4539548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | - |
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| Start bp | 526080 |
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| End bp | 527951 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639745908 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_891711 |
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| Protein GI | 118475308 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.981819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG CAAAAGAGAC TTTTGCACAA ATAGAAGAGT TATTTAAAGA GAACTCAAAA
GGTTATGTTA CTTTTGAAAA GCTTGTAAGA TTGTTTGACA AAGCTCCAAC GGTTGCTACC
ATAAAAAAAG TCGAAACTCT AGCCGAACTC TATAAAATAC AGCTGATAAG TGCTGTAGAA
GCGGCAAAGA TAAAAAATAT ACAAGAAGCT AAAAAATCAG AAGAAGACAA GCTAAAAATC
ATAGATACCG CCTTAGAAGA GGAATTTGAT CTAACTAGTG AGAATGATCT TTTAGAATGG
TCACGATCAG ACAGCCCCGT GAGAATGTAT CTTAGAGAAA TGGGTCAAAT TTCACTTCTA
ACAAAAGAAG AAGAGGTAGA AATCAGTAAA AAAATCGAGC TTGGAGAAGA TATCATCATA
GATGCTTTTT GCTCAGTGCC GTATCTTATT GATTTTATTT TAGATTACAA AGAGCCTCTT
ATAAATAGAG AACGCCGAGT TAAAGAGCTT TTTAAAAGTT TTGACGAGGA AGAGAGCGAA
GAAGAGGAAG AAGAAACAAC TGAAGATGAA TTTGAATATG ATGAGAACGA AGAAGATAGC
GCTACAGCAA AAAAACAGCC AAAAAAACTT GACAAAAGAG CAGAAAAAGT AATAGAAAGC
TTTAAAGCTC TTGAAAAAGC CAAAAAAGAA TGGATGAAAA TAGTAGCAAA ACAAAATATA
TCTATCGAAG AAGAAGCCGA TCTAGTAGCA AAGTTAAATT TAACTTTTAA GAAAAAAGTT
TTGAAAGATA AATTAATGGA TCTTGGACCT ACAAGCAAAC TTATAAATGA AATAGTAAAA
TCCATGGAAA CGGCTTTAAA AAGCGATGAT GACTTTGATA AAGAGCTAAA ACGCCTTGAA
TATCGTCTTC CTATGTTTAG TGCCGAACTC AAAAAAAACC ATCAAGGCAT ACTAAAAGAT
ATAACAAAGC TTTCAAAAGA AGATATCATA TCAAGAGTTC CTGAAGCAAC TATGGTATCA
ACTTATGTAG AGATAAAAAA GTTATTTCAA ACAAAAGAAG CTAGCAAAAC TGGATTTAAT
CTAGAACCAA AAGAGCTAAA AATAGTATTA GATCAGATAA AACGCGGTAA AAATATAAGT
GACGATGCAA AAGCTAGAAT GGCAAAATCA AACCTAAGGC TAGTAGTTAG TATAGCTAAG
CGATATACAA ATCGCGGACT TCCGTTTTTG GATCTTATTC AAGAAGGAAA TATTGGTCTT
ATGAAAGCGG TTGATAAATT TGAATATAAA AAAGGTTATA AATTTTCAAC ATATGCTACA
TGGTGGATAA GACAAGCTAT AAGTCGTGCT ATAGCTGATC AGGCCAGAAC GATACGCATA
CCGATCCATA TGATAGAAAC TATAAACCGT ATAAATAAAA TCAATAGAAA ATATCTACAA
GAAGAAGGAA AAGAGCCAGA TGTAAGCATC ATAGCAAGAG AGGTAGGTCT TAGTATAGAT
AAAGTTAAGC AAGTTATCAA AATTACCAAA GAACCTATAA GTCTTGAAGC TCCAATCGGC
AGTGAAGATG ATGGCAAATA CGGCGATTTT GTAGAAGATA AAACAACTCT TAGCCCAATG
GAACAGATAC TAAAAGGCGA CTTAAAAGAG CAGATAGATG AAGTATTAGA TCAGCTAAAC
GATCGTGAAA AAGCGGTTAT AAGAATGCGT TTTGGTCTTT TAGAAGATGA AAGCGATAGA
ACATTAGAAG AGATAGGAAA AGAACTAAAC GTGACAAGAG AGCGTGTCAG ACAGATCGAA
AGCTCAGCCA TAAAAAAACT AAAACATCCA AAAGTAGGTA GAAAACTCAA AAATTACATA
GAGGGAAATT AA
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| Protein sequence | MSAAKETFAQ IEELFKENSK GYVTFEKLVR LFDKAPTVAT IKKVETLAEL YKIQLISAVE
AAKIKNIQEA KKSEEDKLKI IDTALEEEFD LTSENDLLEW SRSDSPVRMY LREMGQISLL
TKEEEVEISK KIELGEDIII DAFCSVPYLI DFILDYKEPL INRERRVKEL FKSFDEEESE
EEEEETTEDE FEYDENEEDS ATAKKQPKKL DKRAEKVIES FKALEKAKKE WMKIVAKQNI
SIEEEADLVA KLNLTFKKKV LKDKLMDLGP TSKLINEIVK SMETALKSDD DFDKELKRLE
YRLPMFSAEL KKNHQGILKD ITKLSKEDII SRVPEATMVS TYVEIKKLFQ TKEASKTGFN
LEPKELKIVL DQIKRGKNIS DDAKARMAKS NLRLVVSIAK RYTNRGLPFL DLIQEGNIGL
MKAVDKFEYK KGYKFSTYAT WWIRQAISRA IADQARTIRI PIHMIETINR INKINRKYLQ
EEGKEPDVSI IAREVGLSID KVKQVIKITK EPISLEAPIG SEDDGKYGDF VEDKTTLSPM
EQILKGDLKE QIDEVLDQLN DREKAVIRMR FGLLEDESDR TLEEIGKELN VTRERVRQIE
SSAIKKLKHP KVGRKLKNYI EGN
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