Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0495 |
Symbol | |
ID | 4538928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 497642 |
End bp | 498406 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 639745882 |
Product | putative ABC-2 type transport system permease protein |
Protein accession | YP_891689 |
Protein GI | 118474383 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0237472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAAAA TAAAAGAGAT ATTATCATTA ACTAAATTTG ATTTTAAACA ACGATATAAT TCAACAAATC TCGGCTCCCT TTGGTATCTT GTCACTCCGC TTGTTATGAT ATTTATATAT ACGGTAATTT TTTCAGATTT TATGAATGCA AGACTTGGTA TCAATAGTGA TAAATGGTCA TATAGTTTAT ATTTAGTTCC TGGGTTATTC TCATTTGCAG CATTCCAAAA TACTATTTTA AATATATGTG ATGTTCCGAC TCAAAAAGCT GGAGTTCTTA AAAAAATCAG CATTCCACTA TATGCATTTG AAATAAGCCC AACGATAATC CAAATAATTA TATTTTCTAT CTCAATGATC CTTGGGGTAA TATTTTTATC TATTGTTTCC AATCTGAATG TTCAAATTTT ACTTATCATT CCTATGATGA TTTTACAAAG TATATTTGCA TTCGCTCTTG GAGTTATATT ATCTATCTTG TCTATATTTA TAAAAGATAT TAAAGAGGGT TTGCCTATAT TCTTGCAGCT ACTTTTTTGG GCAACTCCTA TAGTATATCC TTACCAAATC ATAGAACAAA AGTTGCCTAT ACTCCTTGAA ATAAACCCGT TGTATTATTT CATCAAATTT TATCAAAAAA TATTTTTATC AAAAAATGTC GAATACTCAG ATTTTATTAC TCCATTTATA CTTAGTATGA TAACGCTTTT GATAGCTGCT TATATCTATA AAAAGCTTAT ATCAGCAATA AAGGATATGT ATTGA
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Protein sequence | MNKIKEILSL TKFDFKQRYN STNLGSLWYL VTPLVMIFIY TVIFSDFMNA RLGINSDKWS YSLYLVPGLF SFAAFQNTIL NICDVPTQKA GVLKKISIPL YAFEISPTII QIIIFSISMI LGVIFLSIVS NLNVQILLII PMMILQSIFA FALGVILSIL SIFIKDIKEG LPIFLQLLFW ATPIVYPYQI IEQKLPILLE INPLYYFIKF YQKIFLSKNV EYSDFITPFI LSMITLLIAA YIYKKLISAI KDMY
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