| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0458 |
|---|
| Symbol | |
|---|
| ID | 4538403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 438773 |
|---|
| End bp | 440056 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639745850 |
|---|
| Product | sape |
|---|
| Protein accession | YP_891657 |
|---|
| Protein GI | 118475239 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00190667 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACTAA AAAGCGAAAG CGGAACGGTA AAGCTAGGTC TGTTTATGAT ATTGTTGCTG
GTGGGTATTT TTGGAGTGTG GATGGGAACC GCACCGTTAA ATAGCGCCGC CGTAGCACCG
GGTCAAGTCG GTGTTTTAAG CAATAAAAAG GTTGTTCAGC ATTTAGAGGG CGGCGTAGTA
GATAAAATAT ATGTAAAAGA CGGGGACGTA GTAAAAAAAG GGCAAGTACT AATAGAGATA
AAAAACGTTA GACTAAATAG CGAATTAGAT ATAGTCAAAA GCGAATATCT CCAAACTAGT
GTTCTAGTAA GCCGCTTAGA GGCACAAAGA GACGATAAAG ACCAAATAGA ATTTAGTAAT
GATGTGAAGA GTTATCCGGA TTTTGAGTCT GCATCAAAAG GACAAATAAG CATATTTAAT
GAACAAAATA AGCTTTTAAA AGATGAGATA ACTATACTAA ATCAAAGAAT AGACCAGCTA
AGAAAACAGA TAGAAGGCAT AAATGCTATA GTAGATGCAA AAAAACAGAG AGTCGAGTCC
TTGAATGAAG AAACAAAAGA GTGGGAAAGA CTATTTAAAG AGCAACTAAC AGATAAAATC
AGATTAAGAG ATATACAAAG AGAAAGAACT GCAGCAGGCG GTGAGATTGC ATCTGGAATT
TCAGATATAG CAAAATTAAA TGTTCAAATC ACCGAAACAA AGCAACAAAT TTTGTTTCGC
GAACGAACAT TTAAAGAAGA TGTGCTGAAA AAATACGAAG AGGCTAAATT AAAATTAACC
GATCTTAGTG CTAGATTAAG AGCGCTTGAC GATCAACAAG AAAGAGCATT AGTAAAAGCT
CCTGTTGATG GTATAGTAGT AGAGTTGGCT ACTCATACTA TAGGAGGCGT TGTACGTCCG
GGTGAATCTA TAATGAGTAT AGTTCCGGAC GATAGCGACT ATATAATGGA AGCAAAAATG
CATATTACAG ATATAGACAA AGTTCATGTA GGTTTGCCTG CAGATATAAG ATTTAGTGCA
TTTAACAGCA AAACCGCCCA TGTTATAGAA GGTGAAGTTA CATACGTATC AGCAGATACG
CTAAAAGATT CTCATGGAAA TCCGTACTAT GAAATAAAAG CTAAATTGAC CAAAAAAGGT
ATCGAAGAAG TTAAGAAAAA TGGATTTTTT CTAGTTCCCG GAATGCCTGC CGAAATCATA
GTAAAAACAG GTGAAAGAAC AGTATTAAGC TATATCATAA AACCATTTAC AGATATGTTC
CAAAGGGCAT TTAATGAAGA CTAA
|
|---|
| Protein sequence | MVLKSESGTV KLGLFMILLL VGIFGVWMGT APLNSAAVAP GQVGVLSNKK VVQHLEGGVV
DKIYVKDGDV VKKGQVLIEI KNVRLNSELD IVKSEYLQTS VLVSRLEAQR DDKDQIEFSN
DVKSYPDFES ASKGQISIFN EQNKLLKDEI TILNQRIDQL RKQIEGINAI VDAKKQRVES
LNEETKEWER LFKEQLTDKI RLRDIQRERT AAGGEIASGI SDIAKLNVQI TETKQQILFR
ERTFKEDVLK KYEEAKLKLT DLSARLRALD DQQERALVKA PVDGIVVELA THTIGGVVRP
GESIMSIVPD DSDYIMEAKM HITDIDKVHV GLPADIRFSA FNSKTAHVIE GEVTYVSADT
LKDSHGNPYY EIKAKLTKKG IEEVKKNGFF LVPGMPAEII VKTGERTVLS YIIKPFTDMF
QRAFNED
|
|---|
| |