| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0392 |
|---|
| Symbol | nifJ |
|---|
| ID | 4537872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 361290 |
|---|
| End bp | 364844 |
|---|
| Gene Length | 3555 bp |
|---|
| Protein Length | 1184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639745787 |
|---|
| Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
|---|
| Protein accession | YP_891594 |
|---|
| Protein GI | 118474239 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAG TTATGAAGAC AATGGACGGT AATGAGGCTG CTGCATACGC GGCTTATGCT
TTCACTGAAG TAGCAGGTAT TTATCCTATA ACGCCTAGTT CCCCTATGGC TGATTATACT
GATATTTGGG CTTCTCAAGG TAAAAAAAAT ATTTTTGGTA TGCCTGTTAA AGTTGTGGAG
ATGCAAAGTG AAGCAGGAGC TGCTGGAACT GTGCATGGAA GCTTGCAAGT CGGTGCCCTT
ACTACTACTT ATACTGCTGC TCAAGGTTTA TTATTAAAAA TTCCAAATAT GTATAAAATA
GCAGGACAGA TGCTTCCGGG CGTTATTCAT GTGGCTGCAC GTTCTATAGC TGCTCAGGCT
CTTTCTATAT TTGGCGATCA TCAAGATGTG TATGCCTGTA GACAAACAGG TTTTGCCATG
CTTGCAACAG GTTCGGTTCA AGAGGTGATG GATCTAGCAG GAGTTGCCCA CTTGGCTGCT
ATTAAAGGTC GCGTACCGTT TTTACATTTC TTTGATGGAT TTAGAACAAG CCATGAAATT
CAGAAAGTTG AAGTTATTGA TTACTCTGTT TTTGATAAGT TAGTAGATAA AGAAGCTATT
CAAAAATTTC GCGACGAAAG TATGAATCCA GAGAGTCCAA AAACAAGAGG AACTGCTCAA
AATGATGATA TATACTTTCA AACAAGAGAG TTGGTAAATA AATTTTATGA TGATCTTCCA
GATGTGGTAG CTCACTATAT GGATGAAATT TCAAAAGAGA CAAAACGAGA GTATAAACCA
TTTGTATATT ATGGAGATAA AAAGCCTGAT CGTGTTGTTA TAGCTATGGG TTCGGTTACG
CAAACTTTAG AAGAAGTTGT TGATTATTTA AGAAGCAAAG GCGAGAAAGT AGGTATAGTA
AAAGTACATC TATATAGACC TTTTAGTTTG AAATATTTCT TTGATGTGAT TCCAAAATCT
GTTAAAAAAA TAGCTGTTTT AGATAGAACA AAAGAGCCAG GAAGTCTTGG AGAGCCGCTA
TATCTTGATA TAAAAGCAGC GTATTATGGA AGTAAAAAAT CCCCAACTAT AGTCGGAGGT
AGATACGGAC TTAGCTCAAA AGACGTAGAT CCTGCTCAGA TGGTGGCAGT ATTTGAAAAT
TTAAAACAAG ATGAGCCAAA AAACAACTTC ACAGTAGGTA TAAATGATGA TGTAACAAAT
TTATCTTTAG AAGTTGGAGA TAAAATATCA CTTAGCGACG ATGACTGTAT AGAGTGCTTA
TTTTATGGAC TTGGCGCAGA TGGAACTGTC GGAGCAAATA AAAACTCAAT CAAAATTATA
GGCGATAAAA CCGATCTTTA TGCACAAGCT TACTTTGCAT ATGATAGTAA AAAATCAGGC
GGCTATACAA GAAGTCACTT AAGATTCGGT AAAAAACCTA TCCGCTCAAC TTATCTAGTA
TCAAATCCTC ATTTTGTAGC GTGCTCCGTT GCTGCATATC TTGATATTTA TGATGTTGTA
GATGGATTAA GAGATGGAGG AACGTTTTTA CTTAACTCAA TCTGGGATGC CGATGAAACA
GTAAAAAGAA TTCCAAATAA AGTAAAACGT TTATTAGCTC AGAAAAAAGC AAATTTCTAT
ATACTTAATG CTACAAAATT GGCTTATGAT ATAGGTCTTG GTAATCGTAC AAATACAATT
ATGCAATCGG CGTTTTTTAA ACTTGCAAAT ATTATCGACT TTAAAGATGC TCAAAACTAT
ATGAAAGAGT ATGCTAAAAA AACATATGCT AAAAAAGGCG ATAAGATAGT TGAGATGAAC
TATGCAGCCA TAGATCAAGG CGCTGATAAA TTAGTTGAAA TTAAAGTAGA TCCAAAATGG
GCAAAATTAA AAGATGAAGT TATAAGTGAA AATAAATATA TAGGTGACGA TTTTATAGAA
AAAGTAGTAA AACCTATGAA CGCAGCACGC GGAGACGATC TTCCTGTTTC GGTATTTTTG
GGTTATGAAG ACGGTGGATT CGAAGCTGGT ACGACAGAAT ATGAAAAGCG CGGCGTAGGT
GTTATGGTTC CAAAATGGAT AGAGGAAAAT TGTATCCAGT GTAATCAATG CGCTTTTGTG
TGTCCTCACG CAGTTATTAG ACCTTTTCTT ATAGATGAAA AAGAGCTAAG CGCTGCTCCT
AAAGGTGTAA AATCTCATGT TTTAGATGCA AAAGGGAAAG AGATAAAAGA GTTCAAGTAT
AAAATTCAAG TAAGTCCTCT TGATTGTACA GGTTGCGAAC TTTGTGCTCA AAACTGCCCT
AGCAAAGAGA AATCTCTTGT TATGGTTCCA CTTGGTGAAG AGATGGATAA AGGTGAGCAA
GAAAATGCCG ATTATCTATT TAAAAATGTA AAATATAAAG ATGACTTGAT GAGTAAAGAC
AGCGTGAAAG GAGCTACATT TGCTCAGCCG TTGTTTGAAT TTCACGGTGC ATGCCCTGGA
TGTGGAGAGA CTCCTTATAT AACTTTGGTC ACAAGATTAT TCGGAGAGCA TATGATGGTA
GCAAACGCTA CTGGATGCAG CTCGATTTAC GGAGGTTCTG CACCATCTAT GCCTTATCGT
AAGTCAAATA AAAACGGTCA TGGCGTAGCT TGGGCAAATT CGCTTTTTGA AGATAATGCT
GAGTTCGGTA TGGGCATGGA AGTAGCAACT GAAACTATAC GCCACCGCAT AGAAAATATT
ATGCGAGATA CCATGGATAA AGTGCCAAAT GCACTTGCAG CTCTTTATAA AGATTGGATT
GAGTTTAAAG GAGATATCAC AAAAACAGCT CAAATAAGAG ATATGTTAGT GCCGCTTCTT
GAAGCGAATA AAAAAGTTGA TGGAGTAAAA GATCTTCTTA GCTTGAAAAA ATATATATCT
CGCAAATCTC AATGGATAAT AGGCGGCGAT GGTTGGGCTT ATGATATAGG ATATGGCGGA
CTTGATCATG TTTTAGCAAG CGGTGAGAAT GTCAATGTTT TAGTTCTTGA TACTGAAGTT
TATTCAAACA CTGGAGGACA AAGCTCAAAA TCTAGCCGTA GTGGTTCTGT CGCACAATTT
ACATCTAGCG GTAAAGCGGT TCAAAAGAAA GATTTAGGAC AAATCGCTAT GACATACGGA
AATATTTTCG TAGCACAAAT CAATTCAAAC GCAAGTCAAG CAAATGTAGT AAAAGCTATA
GCTGCGGCAG AAGCTTATAA TGGGCCAAGC CTTGTTATAG CGTATTCCCC TTGTATAGCT
CACGGTATTA AAGGCGGCTT ATCTTTATCT GGAGATCAAG CAGAACTTGC TACAAAATGC
GGTTATTGGC CTACATTTAT CTATGATCCG CGTTTAGTAA AAGAAGGAAA AAATCCTCTT
AAGATCACGT CTAAAGAACC AGAGTGGGAT AGATATGAAG AGTTTTTACT AAATGAAGTT
CGCTATAATT CGCTTAAAAA GCTAAATCCA GAACATGCAG CTGAATTATT TAGTCAAAAT
AAAGCAGATT CGCAAAGAAG ATATCGTCAG TTAAGACGTC TTGCAAATGC TGATTTCAGC
GATGAATTAG CATAA
|
|---|
| Protein sequence | MDKVMKTMDG NEAAAYAAYA FTEVAGIYPI TPSSPMADYT DIWASQGKKN IFGMPVKVVE
MQSEAGAAGT VHGSLQVGAL TTTYTAAQGL LLKIPNMYKI AGQMLPGVIH VAARSIAAQA
LSIFGDHQDV YACRQTGFAM LATGSVQEVM DLAGVAHLAA IKGRVPFLHF FDGFRTSHEI
QKVEVIDYSV FDKLVDKEAI QKFRDESMNP ESPKTRGTAQ NDDIYFQTRE LVNKFYDDLP
DVVAHYMDEI SKETKREYKP FVYYGDKKPD RVVIAMGSVT QTLEEVVDYL RSKGEKVGIV
KVHLYRPFSL KYFFDVIPKS VKKIAVLDRT KEPGSLGEPL YLDIKAAYYG SKKSPTIVGG
RYGLSSKDVD PAQMVAVFEN LKQDEPKNNF TVGINDDVTN LSLEVGDKIS LSDDDCIECL
FYGLGADGTV GANKNSIKII GDKTDLYAQA YFAYDSKKSG GYTRSHLRFG KKPIRSTYLV
SNPHFVACSV AAYLDIYDVV DGLRDGGTFL LNSIWDADET VKRIPNKVKR LLAQKKANFY
ILNATKLAYD IGLGNRTNTI MQSAFFKLAN IIDFKDAQNY MKEYAKKTYA KKGDKIVEMN
YAAIDQGADK LVEIKVDPKW AKLKDEVISE NKYIGDDFIE KVVKPMNAAR GDDLPVSVFL
GYEDGGFEAG TTEYEKRGVG VMVPKWIEEN CIQCNQCAFV CPHAVIRPFL IDEKELSAAP
KGVKSHVLDA KGKEIKEFKY KIQVSPLDCT GCELCAQNCP SKEKSLVMVP LGEEMDKGEQ
ENADYLFKNV KYKDDLMSKD SVKGATFAQP LFEFHGACPG CGETPYITLV TRLFGEHMMV
ANATGCSSIY GGSAPSMPYR KSNKNGHGVA WANSLFEDNA EFGMGMEVAT ETIRHRIENI
MRDTMDKVPN ALAALYKDWI EFKGDITKTA QIRDMLVPLL EANKKVDGVK DLLSLKKYIS
RKSQWIIGGD GWAYDIGYGG LDHVLASGEN VNVLVLDTEV YSNTGGQSSK SSRSGSVAQF
TSSGKAVQKK DLGQIAMTYG NIFVAQINSN ASQANVVKAI AAAEAYNGPS LVIAYSPCIA
HGIKGGLSLS GDQAELATKC GYWPTFIYDP RLVKEGKNPL KITSKEPEWD RYEEFLLNEV
RYNSLKKLNP EHAAELFSQN KADSQRRYRQ LRRLANADFS DELA
|
|---|
| |