| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0368 |
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| Symbol | |
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| ID | 4539124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 335852 |
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| End bp | 339979 |
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| Gene Length | 4128 bp |
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| Protein Length | 1375 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639745763 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor |
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| Protein accession | YP_891570 |
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| Protein GI | 118475273 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.147732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTGG ACAAGGGCGA CGTATCGCTT TCTTCTGGGC TTTTGAAAAG AGCCTACCTA
ATATTTATCT TATGCGTAGG ATCTATAGTC TGCTTTTTAT CTTTTATAAT ATTCGTTGAA
CTCTATAAAT TAGAAGACGG ATTAAAAAGA TCAAATTCTT ATCATATGAT GAGAGTTATG
AGTAAGCTTG AGACTATACA CTCTGAGTTA GCATATCTTT TAGAAGATAA TATCAGCGAT
GAAGAGTTTT ATGAAACTAT CGCAGATAAT GATATCTTAG ATGGTATATT TTTAACGGAT
AACAACTTTA CCATTATAAA ATCATATTCG AAATTTCAAA ACGATCTTAG CTCATTAAAA
CTATTTAATT ATAAAGATCA TTTTAACAAA TATGGATTTT TTATATCTAA ATTTATATAT
TTAGAGCCTG ATCATCCGAA TATATTTATT ATTTTGCCTT ATGTTAATGG AGTAAATTTA
GTTGGTATGC TTGACGCTTC AAAGCTTGCC TCATTTGCTC TTTTAGATGA TGCAAACAAG
TATTCGTATA TGATGGATTC TGAGGGTTTT ATAGTTTTAG ATTCCATAGG TAGCAATATA
TACGATACGT TTAACATAGA TTATGATTGG AAAAATAGCC AAAAGATGCA TCTTTCGGTT
GATTATTCTA CAAAACAACT TAGTTTTTAT TCAGTAGAGT TTAACAAAGG TTTAAATTTA
GCCATCATAT CAAAAGAGCC GTTTTTCGAT ATATTTAACT CGTATTTAGT AGTAATCGCA
GTAGCTATCA TACTGTTGGT ATTTGCTTGT TTGGTTTTGA TAGATAATAT AATATTTTTA
AAGCGAAATG TTATATCTCC TATTAGCAAG CTAAAAAGTC TTTTGTCTGG ATTAGAAATA
GGCGAAATCG ATGTTAATAA ATTTAAATCA AATAAAGATT TTGACGACAT TTGCTATGAA
ATATTAAATT TATACACAAG TCAAGTTATA GCAAAAAATG ATCTTAGAGA TTATAAAGAA
CAGTATGCTT TGATATTTCA AAAAAGCTCT ATAAAAATAC TATTTGTAGA TGCAAAAAAT
GGGCAGATTA TAGAAGCGAG CGAGTCTGCT ATAGAGTTTT ACGGTTATGA TAAAGATATG
CTTCTTACTA TGAATGTATT TGATTTACAA GCAACTAGTT TGTATGATTA TTCTTATAGC
AAATTAGCAG ATATGAATGA CGATGAAAAT ATCTACTGTT CTCACAGACT AGCAAACGGC
GATCTAAAAA TAGTTCAGAT AAAAATCACT CCGGTAAGCT CTTATTTAAA TGATTTTTAT
TTTATGATTA TTTGGGACGC AACCGAAAAT CAAAAAATGA TAGAAAATTT AAATAAAGAG
AAACATCTAT TGCTTTCAAG CCCTATATTA ATAGCTACTT TTAAAGTAGA TGAAAACTGG
AAAATAATTC AAATTTCTAA TAACGTATCT GATATATTAG GATATAACAT CGAAGATATT
TTATTCAAAA ATTTTAGTTT TAGAAGTATA ATTCATAAAG AAGATATAGC AAATTTAATT
GTAGATATAA AACATAGAAT GAAGCTTATA GATACGCCTT ACGAGACGGA TAATGAGCTT
GATAGGCTTT GTCGTATAAA GCTTTCAAAC GGCAATTACG ACTGGTTTAA AGTATTTATC
AAGATATCAA AAGATGCAAA CGGCGATATG TTTGTTACTG TGTTTATGTT TAATAGTACA
AATCAAAAGC TTACAGAAGA TATATTTAAA GATAAGATAA ATAAGTACCA AAATCTACTT
TGGGCTACTT CTGGAATGTC TTTTGAATAT GATATTAAAA AGCGTGTATA TACATTTTCA
AATAGCTTTA TAAATTTACT AGGATATCGA AATAGTGATG ATCTAGGAGT TATTAACTCT
GAAAATATAT CAAAAATAGT ATATAAAAGC GATTTAGATA AAGTAGTTTT AGCGTGGGAT
AACTATCTAA AAGGACTTAG TCCAAGCATA AATACCGAGA TCAGATGTAT AGCTAAAGAT
GGAAGATATA TTTGGGTATG CATAAAAGCA AAAACCGCGA CATCTAATCT TGATGGAACT
CCAAATTTGA TATCTGGAAT GCTTGAAGAT ATCACCATCA AAAAAGAGTC TGAAGCACAG
TTGCAACTCA TAGCTAGTGT ATTTTCTTAC TCTAGAGAAG GCATTATGAT AACTGATCTA
AACGGTTTGA TATTAGATGT AAATGACGCT TTTGTTCAAA TCACTGGATA CGGCAAAGAA
GAAGTAAGAG GCAAATATCC AAATATGCTA AAATCAGATC GTCATAATAA TAAATTCTAT
GCTAAAATAT GGGCAGATAT AAAGCAAAGC GGTTTTTGGC GCGGTGAAAT TTGGAATAAA
AGAAAAAACG GTCAAATATA TCCAGAAATT CTAACTATAA GTGCAGTCAA AAATCAGCTT
GATGAAGTTC AGCATTATGT TGCTATATTT TATGATATTA CGTATATTAA AGAGAATGAA
ACAAGATTAG AAAAAATAGC TCATTATGAT CCTCTTACAA AGCTTCCAAA TAGATTTTTA
TTATTAGAAA AACTTGCTAT AGCTATGAAT AACGTTAAAG AGAACGGCAA AAAAATAGCT
GTTATATATC TGGATTTAGA CGGATTTAAA AAAGCAAATG ATACTTATGG GCATAATTGC
GGAGATGGGC TTTTAGTAGC TATATCTAGT CGTATGCAAG GTATTATATC AAATGGCGAT
AATTTGATAG CGCGTTTCGG AGGAGATGAG TTTGTAGCTC TCATTAATGA TGTAAGAGAT
GAGAATGCTC TTATTAAGAT CTTAGACGAT ATGCTTTTAG CCGCTCGTGA TAAAACGGTT
ATCAATAGCA ACAAAATTCA AGTAAGCACA AGCATAGGCG TAGCATTTTA TGATAGACAT
AGTGATATAT CTATGGAAGA TCTATTAAAA AGAGCAGATT GGGCGATGTA TCATGCTAAG
TTATCTGGTA AAAATAGATA TTATATATTT GATGAAAATA GAGATGAAAT TTTTAACCAG
TATAATGAGA GTTTATTATC TAAAGATAAA TTTGATTCCG ATGAGTTTTT CTTGATGTAC
CAACCAGTAG TCAATATAAA AGATGCGAAA ATCACAAGTT TTGAAGTTCT TCTTAGATGG
AAACATCCGC AAAAAGGTAT AATGCTTCCT GTGGATTTCT TGCATATATT TAGCGATAAA
GTCTGGTTTG ATGAACTTAC TATATGGATT ATTATAAATG CTCTTAGAGA TTCTGAAGAT
ATTTTTAATA AAGGGATAAA ATTAAGTATC AATATACCGT TTGAACAGCT AAACGACGAG
ATCTTTTTTG CTAAATTTAA AGATCTTTAT AAAAATAGCG ATTTAAGATT TGATATGCTT
GAAATAGAGA TAACAGACGC TATGTCGGTA AAAGATATTG AAAACGAGAT ATTAAATTTA
GTAATATATG AAGATCTAGG TATAAAGTTT GTATTTGATG ATTTTGGGTC AAGCTTATCA
CTTGCTAACA CTATGAAAAC TGCTCCTACA AATACATATA AAATAAATAA AAAATATGCT
CTTGAGCTGC TTGATAGAGC AGATAATGTA GATATGTTGC AGACTATATT AAATATATGT
AGCGCGTTTA AAAAACGTGC TATAATTAAA GGTGTAGAAA ATGAGTATAT CTACAACATA
GTTGCAAATA TAGGCTTTGT AGAGCTACAA GGCAATTTTA TAAGCAAACC GATATTTAAA
GATGATATAT CAGATATGAT AAATACAATT TATATTAAAC GAGTTTTTAA TCCAAATTTA
GAAAAGATAC CGCTTTATAA ATTTATCATA TATCAAATAA ATGCTATTAA GCAGATTATA
ATATCTATAG AAAATTATAA CACTTCTATA TTTGATTACT CTACTTATAG AAAAGTATAT
GACGAGTTTG ATAGGCTAAA AGAAGTACCG GAATCCTGCA AAGAAGCAGA TAAACTTATA
ACTTTGGTAT TTAGTAGTAA TTTTATAAAC AAAGAGGAGA TAGCGTATTT GCTAAATGAG
TTAGAACATA AAAAATTAAA TATTTTAAAC ACCATAATCG GAGAATAA
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| Protein sequence | MFVDKGDVSL SSGLLKRAYL IFILCVGSIV CFLSFIIFVE LYKLEDGLKR SNSYHMMRVM
SKLETIHSEL AYLLEDNISD EEFYETIADN DILDGIFLTD NNFTIIKSYS KFQNDLSSLK
LFNYKDHFNK YGFFISKFIY LEPDHPNIFI ILPYVNGVNL VGMLDASKLA SFALLDDANK
YSYMMDSEGF IVLDSIGSNI YDTFNIDYDW KNSQKMHLSV DYSTKQLSFY SVEFNKGLNL
AIISKEPFFD IFNSYLVVIA VAIILLVFAC LVLIDNIIFL KRNVISPISK LKSLLSGLEI
GEIDVNKFKS NKDFDDICYE ILNLYTSQVI AKNDLRDYKE QYALIFQKSS IKILFVDAKN
GQIIEASESA IEFYGYDKDM LLTMNVFDLQ ATSLYDYSYS KLADMNDDEN IYCSHRLANG
DLKIVQIKIT PVSSYLNDFY FMIIWDATEN QKMIENLNKE KHLLLSSPIL IATFKVDENW
KIIQISNNVS DILGYNIEDI LFKNFSFRSI IHKEDIANLI VDIKHRMKLI DTPYETDNEL
DRLCRIKLSN GNYDWFKVFI KISKDANGDM FVTVFMFNST NQKLTEDIFK DKINKYQNLL
WATSGMSFEY DIKKRVYTFS NSFINLLGYR NSDDLGVINS ENISKIVYKS DLDKVVLAWD
NYLKGLSPSI NTEIRCIAKD GRYIWVCIKA KTATSNLDGT PNLISGMLED ITIKKESEAQ
LQLIASVFSY SREGIMITDL NGLILDVNDA FVQITGYGKE EVRGKYPNML KSDRHNNKFY
AKIWADIKQS GFWRGEIWNK RKNGQIYPEI LTISAVKNQL DEVQHYVAIF YDITYIKENE
TRLEKIAHYD PLTKLPNRFL LLEKLAIAMN NVKENGKKIA VIYLDLDGFK KANDTYGHNC
GDGLLVAISS RMQGIISNGD NLIARFGGDE FVALINDVRD ENALIKILDD MLLAARDKTV
INSNKIQVST SIGVAFYDRH SDISMEDLLK RADWAMYHAK LSGKNRYYIF DENRDEIFNQ
YNESLLSKDK FDSDEFFLMY QPVVNIKDAK ITSFEVLLRW KHPQKGIMLP VDFLHIFSDK
VWFDELTIWI IINALRDSED IFNKGIKLSI NIPFEQLNDE IFFAKFKDLY KNSDLRFDML
EIEITDAMSV KDIENEILNL VIYEDLGIKF VFDDFGSSLS LANTMKTAPT NTYKINKKYA
LELLDRADNV DMLQTILNIC SAFKKRAIIK GVENEYIYNI VANIGFVELQ GNFISKPIFK
DDISDMINTI YIKRVFNPNL EKIPLYKFII YQINAIKQII ISIENYNTSI FDYSTYRKVY
DEFDRLKEVP ESCKEADKLI TLVFSSNFIN KEEIAYLLNE LEHKKLNILN TIIGE
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