| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0353 |
|---|
| Symbol | trpB |
|---|
| ID | 4538523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 323169 |
|---|
| End bp | 324350 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639745748 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_891555 |
|---|
| Protein GI | 118474206 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAA AAGCGTATTT TGGAAAATAT GGTGGTCAGT TTGTTCCGGA GACTGCTATG
AACGCTCTTT TGGAGCTTGA AGAAGCTTAT GAGAGCATAG CAAATACCAA AGAATTTAGA
GATGAGTTAG ATTCTCTTTT AAAAGATTAT GTCGGCAGAC CAAGTCCGTT GTATCATGCA
AAAAGGTTAA GCGAGTATTA CGGTCACGAA ATTTATCTCA AGCGCGAAGA TCTAAATCAT
ACTGGAGCTC ATAAGATAAA TAATGCTTTA GCTCAAGCAT TGCTCGCAAA AAAAATGGGA
AAAAGAAAGG TGATGGCTGA AACAGGAGCT GGACAGCACG GAGTTGCGAC TGCGACTGCT
GCTGCACTTT TAGGTTTAGA ATGCGACGTA TATATGGGAG AGTGTGACAC TAAAAGACAA
GCGTTAAACG TCTATAAAAT GCATCTTTTA GGAGCAAACG TAGTAAGTAT AACCGATGGT
TTGGCTACTT TAAAAGAAGC TACCACCGCA GCTATTCAAG CATGGGTAAA TGAGATAGAA
GCAAGGTTCT ATGTTATAGG CTCAGCGGTC GGACCTCATC CGTATCCAAA GATGGTTAGG
GATTTTCAAA GTGTTATAGG GCGCGAAGCC AAAGCTCAGC TAAATGAAAA AGGAGTGAAA
CCAGATTACA TTATAGCTTG CGTAGGCGGC GGAAGTAATG CTATAGGTAT ATTTTCAGCA
TTTTTGGGTG ATGAAAACGT GAAGATAATA GGCGTAGAAG CCGCAGGTTT AGGGGCTGAT
ACTCCTTATC ACGCGGCTAC TTTGACAAAA GGAAAAGACG GTATAATCCA TGGTATGAAA
ACAGTGGTTT TACAAGATGA GTACGGAAGA ATTTTGCCTG TTCATAGTAT AAGTGCCGGA
CTTGATTACC CAGGAGTAGG ACCAGAACAC GCTCATTTAA AAGATATTAA AAGAGTAGAA
TACTACGCAG TAAGCGATGA TGAGTGTATA AATGCTCTTA AGCTTTGTAC GCGCTTAGAA
GGTATAATAC CTGCTATAGA AAGCTCTCAC GCTTTAGCTT ATCTTGAAAA ACTCTGTCCG
AATTTAAAAA CAAAATCAAA TATAGTCATA AACGTTAGCG GTAGAGGTGA TAAAGATATG
AATACTATAA TGGAGTATAA AAAAGGAACA ATATATGGAT AA
|
|---|
| Protein sequence | MNVKAYFGKY GGQFVPETAM NALLELEEAY ESIANTKEFR DELDSLLKDY VGRPSPLYHA
KRLSEYYGHE IYLKREDLNH TGAHKINNAL AQALLAKKMG KRKVMAETGA GQHGVATATA
AALLGLECDV YMGECDTKRQ ALNVYKMHLL GANVVSITDG LATLKEATTA AIQAWVNEIE
ARFYVIGSAV GPHPYPKMVR DFQSVIGREA KAQLNEKGVK PDYIIACVGG GSNAIGIFSA
FLGDENVKII GVEAAGLGAD TPYHAATLTK GKDGIIHGMK TVVLQDEYGR ILPVHSISAG
LDYPGVGPEH AHLKDIKRVE YYAVSDDECI NALKLCTRLE GIIPAIESSH ALAYLEKLCP
NLKTKSNIVI NVSGRGDKDM NTIMEYKKGT IYG
|
|---|
| |