Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0218 |
Symbol | ubiA |
ID | 4539320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 198168 |
End bp | 199037 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639745615 |
Product | prenyltransferase |
Protein accession | YP_891422 |
Protein GI | 118475121 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAT TTACTCAAAT TTTAAAAGAT ATAAACGAAC TGATAGTTTT CAAACATTCA GTTTTTGCAC TACCGTTTTT GTTTTCTGCT ATGATAACAG CTAGTAAACT TGAAAGCGGT TCTATGTGGT TTGGAATTCC GCTTTTAATC CTCGGTATTT TATGTGCAGT TAGCGCTAGA AATTATGCTA TGGCATTTAA TCGCTACCTT GATGAGGATA TAGACAGACC AAATCCAAGA TGTGCTTCTC GCCCGAGCGT AGATGGTAGA ATAGGGCGCA AAAATCTTCT CTTATTTATA ATCGTAAACG GTATTATTTT TATCGTCGTG GCGTATTTTA TAAATTCACT TGCATTTTGG TTGAGTTTTT TATTTTTAAT AGTTCTTGGC GGATACTCTT ATTTTAAGAG ATTTTCTAGT TTGGCTCACG TTGTTTTAGG ATTTTGTCTT GGATTGTCTG TTATAGCCGG AGCTATAGCT GTTAGCGGAA ACATTCCTCT TTGGTCTATA CTTCTTTGTT TGGGTGTAAT TTTTTGGGTC GGAGGATTTG ATATTTTATA CTCTTTACAA GATATACAGT ACGATAAAAA AGTCGGACTT TATAGCATTC CTGCTATCTA CGGAGAAAAA TCAGCTATGT TTATCTCGGC TTTATTTCAC TCTTTAGCCG TTGTTTTTTG GCTACTTTTT GCAGGTGCTG CAGGACTAAG TTTTTTTGGT TTTTTAGGTG TCATTTTATG CGCTTTAGTA CTTTATAAAG AGCATACAAT AGTCAGGGCT GATTTTAAAA AAATTGACAA GGCATTTTTT ACATTAAATG GCTATTTAGG CATTATGTTT TTACTATTTG TGTGGGTGGA TTTATGGTAG
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Protein sequence | MAKFTQILKD INELIVFKHS VFALPFLFSA MITASKLESG SMWFGIPLLI LGILCAVSAR NYAMAFNRYL DEDIDRPNPR CASRPSVDGR IGRKNLLLFI IVNGIIFIVV AYFINSLAFW LSFLFLIVLG GYSYFKRFSS LAHVVLGFCL GLSVIAGAIA VSGNIPLWSI LLCLGVIFWV GGFDILYSLQ DIQYDKKVGL YSIPAIYGEK SAMFISALFH SLAVVFWLLF AGAAGLSFFG FLGVILCALV LYKEHTIVRA DFKKIDKAFF TLNGYLGIMF LLFVWVDLW
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