| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0175 |
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| Symbol | topA |
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| ID | 4538255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 156701 |
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| End bp | 158785 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639745573 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_891380 |
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| Protein GI | 118475210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.636929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT TAATTATCGT AGAATCTCCA GCGAAAGCAA AAACTATAAA AAATTTTTTG
GGTAGCGAGT ATAAAGTTAT AGCTAGTAAA GGTCACATTA GAGATCTTCC AAAGTCTAGC
TTCGGCATAA AAATAGAAGA TGATAAATTC ACGCCAGAGT ACAGAGTAAG TAGCGATCAC
AGCGCTATAG TAAAAGAAAT AAAAGATCTA GCAAAGAATG CAGATACCAT ATATCTAGCT
ACCGATGAGG ATAGAGAGGG CGAAGCTATA GCATACCATA TAGCAGCCGC AATAGGTAAA
AAACCTGAGA TGCTTCCAAG AATTGTATTT CACGAGATAA CAAAATCTGC CATACAAAAT
GCATTAGAAA ATCCGCGTAG TTTAAATATG GATAGCGTAA ATGCTCAACA AGCAAGAAGA
CTTTTAGATA GGATAGTCGG TTATAAATTA AGCCCGCTTT TAAACTCAAA AATCCAAAGA
GGTCTTAGTG CGGGGCGCGT TCAGAGTTCG GCTTTGAAGA TATTAGTAGA TAGAGAGCGC
GAAATAAGAA ATTTCAAACC TATAGAATAT TTTAGCATAG ATACTAAATT TAAAAAAGAT
TTAGAAGCTG AACTGGTTGA GTTTGAGGGT TCTAAGATAG AAAAGCTTAC TATAACAAAC
AAAGATCGTG CAAAATTTAT AGTTGATAAA ATAAAAGATG AGAGTTTTAG TGTCGCAAAC
GTAGAAAGCA AAGAGCGAAA GACAAGTCCG CAGCCTCCGT TTATGACTTC TACTTTGCAG
CAAAGTGCGT CAAATAGACT AGGATTTAGC CCCAAAAAAA CTATGATGTT AGCGCAAAAC
TTATATGAAG GTGTACAGAC AAATAACGGT TTTATGGGCG CTATAACATA TATGAGAACA
GATAGCTTAA ATTTAGCTAA AGAAGCTATA AGTGCAGCTA GAGACCTGAT TAAAGAGCAG
TTCGGCGATA AATATCTTCC AAAATCTGCA AATTTTTACA CTACAAAAAA CAAAGGAGCT
CAAGAAGCTC ATGAAGCTAT TCGTCCTACA AATTTAAGCT TTACTCCGAC AGAGGCGGCT
AAGTTTTTAG AAAAAGATCT GCTAAAACTC TATACTCTTA TATATAATAG ATTTTTGGCT
TGTCAAATGT CTGCAAGCGT ATCAGAAACT CAAAATATAT TTATAAACAG TAAAAGCAGT
ATTTTTAAAA TTTCGGGCAG AAAGCTTACG TTTGATGGAT TTTACAGAGT TTATGGGGAT
CTTGATAAAG ATAGGATTCT TCCTAATTTA AACGTAGGCG ATAAAATGGA GCTTGAAAGC
TTAAGCAGCC AAAGTCATTT TACCGAGCCG CCATCAAGAT ATTCAGAAGC CGGTTTGGTA
AAAAAACTTG AGAGTCTTGG TATAGGCAGA CCAAGTACGT ATGCTCCGAC TATTTCTTTG
CTTACTAGCA GAGATTACGT AAAAGTAGAT AAAAAACAGC TTATTCCAAA CGAGATAGCA
TTTAATATAA CTAGTATGCT TGAAGAGCAT TTTAATGATA TAGTAGATAG CGATTTTACC
TCTAAAATGG AAGAGAAACT TGATGATATA GCAGAAAATA AAGCAGATTG GCAAGAGGTT
TTATCTAAAT TCTATCATCC TTTTATGCAA AAAATAGATG ACGGTAAAAA AAATATAAAG
AGTCAAAAAG TAACCGAGCC CATAGGTGAA AAGTGTCCCG AGTGCGGCGG AGAGCTTGTA
AAGCGAAAAG GAAGATTCGG CGAATTTATC GCTTGTTTGA ATTTTCCAAA ATGTAAATAT
TCTAGAAATT TAAAAAATGA AGCTAAAATT GAAAAAAAAG AGCCGCAAAA AATCGGTGTA
GCATGTCCTC AATGCGGCGG AGATATAGTT GAGAGATTTA GTAAAAAAGG TAAATTTTTT
GGGTGCGCAA ACTATCCAAA ATGTAACTTT ATAAGCAAAT ACCAACCTAC AGATCAAAAA
TGCCCGCAAT GTGGTGAAAT GATGGTTTAT AAAGAGCTTA AGAAAGGCAA TTTTTACGAA
TGTTCTGCTT GTAAATTTAA AAAAGAAGGG AATAATAATG AGTAA
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| Protein sequence | MSKLIIVESP AKAKTIKNFL GSEYKVIASK GHIRDLPKSS FGIKIEDDKF TPEYRVSSDH
SAIVKEIKDL AKNADTIYLA TDEDREGEAI AYHIAAAIGK KPEMLPRIVF HEITKSAIQN
ALENPRSLNM DSVNAQQARR LLDRIVGYKL SPLLNSKIQR GLSAGRVQSS ALKILVDRER
EIRNFKPIEY FSIDTKFKKD LEAELVEFEG SKIEKLTITN KDRAKFIVDK IKDESFSVAN
VESKERKTSP QPPFMTSTLQ QSASNRLGFS PKKTMMLAQN LYEGVQTNNG FMGAITYMRT
DSLNLAKEAI SAARDLIKEQ FGDKYLPKSA NFYTTKNKGA QEAHEAIRPT NLSFTPTEAA
KFLEKDLLKL YTLIYNRFLA CQMSASVSET QNIFINSKSS IFKISGRKLT FDGFYRVYGD
LDKDRILPNL NVGDKMELES LSSQSHFTEP PSRYSEAGLV KKLESLGIGR PSTYAPTISL
LTSRDYVKVD KKQLIPNEIA FNITSMLEEH FNDIVDSDFT SKMEEKLDDI AENKADWQEV
LSKFYHPFMQ KIDDGKKNIK SQKVTEPIGE KCPECGGELV KRKGRFGEFI ACLNFPKCKY
SRNLKNEAKI EKKEPQKIGV ACPQCGGDIV ERFSKKGKFF GCANYPKCNF ISKYQPTDQK
CPQCGEMMVY KELKKGNFYE CSACKFKKEG NNNE
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