| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0118 |
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| Symbol | |
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| ID | 4538720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | - |
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| Start bp | 98086 |
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| End bp | 101232 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639745516 |
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| Product | transmembrane efflux protein |
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| Protein accession | YP_891328 |
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| Protein GI | 118474846 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AATTTTTTAT CAACAGACCG GTATTCGCCT GCGTTTTGTC GATAATAATC
GTCATCGCCG GCTATATCGG ACTCAAAAGC TCTCCGATAG AAGAGTATCC TCAGCTCACT
CCGCCTCAAA TCATGGTTCA AGCCAATTAT AGCGGTGCAG ACGCACAGAC TATAGCCGAT
ACTATAGCAG CTCCTTTGGA AAATGCTATA AACGGCGTTC AAGATATGAT ATATATGCAA
AGCACTTCAA GCTCTGCTGG AACTATGAGT CTAAGCGTGT ATTTTAAAAT CGGCACGAAT
CCGCAAACCG CAACGGTAAA TGTCAGCAAC CGCGTAACTC CTGCTTTGTC TTTGCTCCCT
GAGGAGGTAA AAAGAGTAGG TGTTACTGTT AGAGAAAGAA GCAGTTCTAT ACTAAATGTT
TTATCGTTTT ATGACCCAAG TGGTAAAATG AGCGATACCG AGATCAGCAA TTATATAAAT
ATCAACGTAG CTGATGCCAT AAAAAGAGTT CCGGGAGTTG GAGACGCTGT TGTTATAGGA
AACAAAGACT ACTCTATGAG GGTTTGGATA AAACCAGATC TCCTTAAAAA ATACTCTTTA
ACAACAACAG ACGTGATAAA CTCTATAAAA GAGCAAAATA GTCAGTATGC TACAGGAAAA
ATAGGCGAAC AGCCGACTCA AACAAGCAAT CCTTATGTTT ATGCCATAAA ACCCGAAGGA
AGACTAAAAA ATGTTTCTGA ATTTGAAAAT ATTATTATAA AAGCCAACAA CAAAGGCAAT
ATAATAAAAC TAAAAGACGT AGCAACCGTG GAGCTTGGCG CACAAAACTA CACATTTGCA
GGAAGAATCA ACGGCGCTAC AATGATACCT ATGCTTGTGT TTTTACAAAG CGGTGCAAAC
GCTCTTAATA CAGCTGATGC TATCGTAAAA AGAGTAGATG AACTCAAAGC CTCTTTTCCA
GGAGATTTAA CATATATAGT CGGCTACGAC ACGACTGAAT TTGTTAAAGT ATCTATAGAT
GAAGTTATAA AAACATTTAT TGAAGCTATG ATTTTAGTTG TTATAGTTAT GTATATGTTC
CTTGGAAACG TAAGGGCTAC TATAATTCCT ATGTTGGCGG TGCCTGTATC TATTTTAGGA
GCTTTTGGCG GACTTTATGC TATGGGGTTT TCTATAAATT TGATAACATT GTTCGCACTT
ATACTAGCCA TAGGAATAGT CGTCGATGAT GCTATTATCG TTATAGAAAA CGTAGAACGG
ATATTGCATG AAGAGCCAAA TCTCACCGTA AAAGAAGCGA CTATAAAAGC TATGAGCGAG
ATAGTAGCGC CTGTTATATC TATAGTTTTG GTACTTTCGG CTGTTTTTAT ACCGGTATCT
TTTATGGAAG GTTTTGTAGG CGTCATACAA AGACAATTTG CGCTAACCTT AGTCGTATCT
GTTTGTATAT CAGGACTTGT TGCGCTAACC CTTACTCCTG CTTTGTGTGC CATGATACTT
CGCAAAAAAG AGAATCCTCC GTTTTGGTTT GTGCGTAAAT TTAATGAATT CTTTGACTTT
TCAACCAAAA TTTTCACGGC CGGAGTAGCT AAAATTTTAA AACATGTCAT TATGAGCTTA
ATATGCGTGG GAATAATTAT ATTTATGATG GCAGAACTAT TTAAAGTCGT TCCAGGGGGG
CTCGTTCCTG CTGAAGACAA AGGTTCTGTT TTAGCTATAA CAAATTTACC TCCTGCTTCG
ACTCTTAGTA GAACTACTGA AGATACAGAG TTTATAAGAA GCATTATATC TCAAAATCCA
AACGTAAAAA ACGTAACCGG ACTTGCAGGA TACGATATGT TGGCGGGCAC TCTTAGAGAA
AACGCGGGTA TAATGTTTAT CAGTATGATA CCATGGAATG AGAGACCAGG AGAAGCCAAC
TCAACTGCAG CGTTTGCAGC TCAATATAAT AAACAGATGT ATATGGCAGA TAGAAACTCT
ATGACGTATT TTATGACTCC GCCTCCCATC ATGGGACTAT CTATAACAGG AGGATTTGAG
CTATTTGCAC AAAATACGGA GGGTAAGAAC TACTCTCAAA TAGAAGCAGA TATGCAAAAA
GTGGTAGCAA AAGCAAATGC TCACCCGGCT TTAAATATGG TTCGTACTAC GCTTGATACA
AATTTCCCTC AATACGATCT AACTCTTGAT AAAGAAAAAA TCAAGATGAT GGGAATAAAT
ATATCAGACG TATTTAATAC TTTAAGCTCC ACAATAGGTC AGTATTATGT AAATGACTTT
AATATGCTAG GTAAAACATT TAAAGTAAAT ATAAGATCAA TGTCAGAGTA TAGAGACTCA
CCGGAGGATT TACGTTCATT ATATGTTAGA AGCCAGGACG GCAAAATGGT ACCGTTAGAC
TCGGTAGTAT CATTAAAAAG AAGCTTAGGA CCAGATAACG TAGATAGATT TAACGCATTT
CCTGCAGCCA AGATCATGGG CGAACCAAAA CCAGGATACA CTTCAGGAGA CGCTATAAAA
GCAATTGAAC AAATTATCAA AGAAGAGCTT CCAACAGGAT ACGATATAGG ATGGTCGGGC
TCGGCGTATC AAGAAGTAGC GTCAACAGGT AAAGGTGCTC AAGCATTTGT ATTTGGTATG
ATATTCGTAT TTTTGATACT TGCGGCACAA TATGAAAGAT GGCTTATGCC ATTAGCAGTC
GTAACTGCGG TTCCTTTTTC AGTATTTGGC TCACTTCTTT TTACATGGAC AAGAGGACTT
AGCAATGATG TATATTTTCA AATAGGACTT TTGCTTCTTA TCGGATTAGC GGCTAAAAAT
GCGATATTGA TAGTTGAGTT TGCGATGCAA GAGCATTTGG CGGGAAAATC CATAAAAGAA
GCCGCGATAA ACGCTGCTAG AATGAGATTT AGACCTATCG TGATGACCTC TTTAGCATTT
ACTCTTGGAG TTTTGCCTAT GGTTGTTGCC ACAGGAGCAG GAGCTGCGTC TCGTCACGCA
CTAGGAACCG GAGTTATAGG CGGTATGATA GCGGCGTCTA CGATAGCGAT TTTCTTTGTG
CCGCTGTTTT TCTATATATT AGAAAGTTTC AATTTGTGGT TAGACAAAAA ACGTGGTAAA
ATAACCTCGG GAGAAGAACA TGCGTAA
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| Protein sequence | MFSKFFINRP VFACVLSIII VIAGYIGLKS SPIEEYPQLT PPQIMVQANY SGADAQTIAD
TIAAPLENAI NGVQDMIYMQ STSSSAGTMS LSVYFKIGTN PQTATVNVSN RVTPALSLLP
EEVKRVGVTV RERSSSILNV LSFYDPSGKM SDTEISNYIN INVADAIKRV PGVGDAVVIG
NKDYSMRVWI KPDLLKKYSL TTTDVINSIK EQNSQYATGK IGEQPTQTSN PYVYAIKPEG
RLKNVSEFEN IIIKANNKGN IIKLKDVATV ELGAQNYTFA GRINGATMIP MLVFLQSGAN
ALNTADAIVK RVDELKASFP GDLTYIVGYD TTEFVKVSID EVIKTFIEAM ILVVIVMYMF
LGNVRATIIP MLAVPVSILG AFGGLYAMGF SINLITLFAL ILAIGIVVDD AIIVIENVER
ILHEEPNLTV KEATIKAMSE IVAPVISIVL VLSAVFIPVS FMEGFVGVIQ RQFALTLVVS
VCISGLVALT LTPALCAMIL RKKENPPFWF VRKFNEFFDF STKIFTAGVA KILKHVIMSL
ICVGIIIFMM AELFKVVPGG LVPAEDKGSV LAITNLPPAS TLSRTTEDTE FIRSIISQNP
NVKNVTGLAG YDMLAGTLRE NAGIMFISMI PWNERPGEAN STAAFAAQYN KQMYMADRNS
MTYFMTPPPI MGLSITGGFE LFAQNTEGKN YSQIEADMQK VVAKANAHPA LNMVRTTLDT
NFPQYDLTLD KEKIKMMGIN ISDVFNTLSS TIGQYYVNDF NMLGKTFKVN IRSMSEYRDS
PEDLRSLYVR SQDGKMVPLD SVVSLKRSLG PDNVDRFNAF PAAKIMGEPK PGYTSGDAIK
AIEQIIKEEL PTGYDIGWSG SAYQEVASTG KGAQAFVFGM IFVFLILAAQ YERWLMPLAV
VTAVPFSVFG SLLFTWTRGL SNDVYFQIGL LLLIGLAAKN AILIVEFAMQ EHLAGKSIKE
AAINAARMRF RPIVMTSLAF TLGVLPMVVA TGAGAASRHA LGTGVIGGMI AASTIAIFFV
PLFFYILESF NLWLDKKRGK ITSGEEHA
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