Gene CFF8240_0069 details

Gene Information

• Locus tag: CFF8240_0069
• Symbol: tkt
• ID: 4539436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 54677
• End bp: 56578
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 639745467
• Product: transketolase
• Protein accession: YP_891279
• Protein GI: 118475100
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.317261
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAGA AACAAGCCGA TACAATAAGG TTTTTATGTG CCGATATGGT TCAAAAAGCA 
AACTCCGGAC ATCCGGGTGC TCCTATGGGT TTGGCTGATA TAATGAGTGT TTTGGTAAAT 
CATATAAAAC ATAATCCTAA AAATCCAACA TGGTTAAATA GAGATAGATT GGTATTTAGC 
GGTGGTCATG CAAGTAGCTT GGTTTATAGT TATTTATATC TTTGTGGTTA TGACGTTAGT 
TTGGATGATT TGAAAAAATT TAGACAACTT CACTCTAAAA CTCCCGGACA TCCCGAGATA 
GAAACCCCGG GAGTAGAGAT AGCAACTGGA CCATTAGGAC AAGGAGTGGC AAATGCTGTA 
GGTTTTGCCA TGGCGGCAAA AAGCGCTTCA AATTTACTTG GAAATGAGAT TATAAATCAT 
AAAGTATATT GTCTGTGCGG CGATGGAGAT CTAGAAGAAG GTATCAGTTA TGAAGCTTGT 
GCTTTGGCTG GAAAACACTC TTTAGATAAT TTAGTGATTA TATATGATAG CAATAATATC 
ACGATAGAGG GCGATACTAG TATAGCGTGG TGTGAAGATG TAAAAGTACG TTTTGAAGCG 
GCTGGATTTG AAGTTGCGCG GATAGATGGA CATAATTATG ATGAGATTGA ATTTGCACTT 
TGCGAAGCAG ATACGAAAGA AAAACCTTAT CTTATTATCG CAAGTACAAA GATTGCTAAA 
GGCGCAGGAG ATTTGGAAGG TAGTCACCAT GCTCACGGCG CTCCGCTTGG TGAAGAAATC 
ATAAAACAAG CTAAAATAGA AGCCGGATTT GATCCGCAAA AACAGTTTTT TGTAGATGAT 
GACGTGCTTT TTAAATTTAG AAGTGCCGTG GAGTTAGGAG ACCTTGCAAA TGCGCAGTGG 
GACAAGCTAG TTAGCGAACT TCCAAATGAG AAAAAAGAGC TTTTAAACAC TCTTTTAAAT 
CCCGATTTTT CTAAAATTGA TTTTCCAAAT TTAAAAGGAG AGAAACTAGC TACTAGAGAT 
AGTAACGGCA AGATTTTAAA TGCTTTAGCT GCCGCGCTTC CCGGATTTAT CGGCGGTAGC 
GCAGATCTTG CACCTAGTAA TAAAACAGAA CTTAAAGGTT TTGGAGACTT TCCAAGAGGT 
AAAAATATGC ACTTTGGCAT AAGAGAACAC GCTATGGGAG CTATATGTAA TGCTTATGCG 
CGTTATGGAC TATTTTTACC GTTTTCGGCA ACGTTTTTTA TATTTAGCGA TTACTTAAAA 
GCAAGTGCTA GAATAGCTGC TTTAATGGGT ATAAAGCATT TTTTTGTCTG GACGCATGAT 
AGCATAGGAG TAGGCGAAGA TGGACCTACG CATGAGCCGA TCGAGCAGCT TTCTACATTT 
AGAGCAATGC CGAATTTTTA CTCATTCCGT CCAGCTGATG GTAATGAAAA TGTGGAATGT 
TGGAAAACTG CATTAAATTT AAATGCTCCA TCTGCATTTG TATGTTCTCG CCAAGCTCTA 
CCTCCTTTAG ATGAGCCTAA ATTCGGAGAT GTAAAAAACG GTGCTTATTT ATTGAAACAA 
GCCTCAAATC CGAAAATAAC TCTAGTTGCT AGTGGAAGTG AAGTCGGACT TTGTTTGGAA 
GCTGCAAGTA TTTTAGATAG TGAGGGCATA GCAACAAACG TTGTATCTGC TCCTTGTTTT 
GATCTGCTTT TGGAGCAAGA TGCGGATTAT GTAAATACGA TTTTTAATCC ATCTACAAAA 
GTTTTAGCAG TAGAAGCAGC AAGCGCTCTT GAATGGTATA AATACGCTGA TGATGTTTTA 
GGAATGCGTA CTTTTGGTGC TAGCGCCCCT GCTAATGAAC TTTTTAAATA TTTTGGCTTT 
ACCGCTACAA ACGTAGCCAA TAGAGCTAAA AATCTACTTT AA 

 

Protein sequence

MFKKQADTIR FLCADMVQKA NSGHPGAPMG LADIMSVLVN HIKHNPKNPT WLNRDRLVFS 
GGHASSLVYS YLYLCGYDVS LDDLKKFRQL HSKTPGHPEI ETPGVEIATG PLGQGVANAV 
GFAMAAKSAS NLLGNEIINH KVYCLCGDGD LEEGISYEAC ALAGKHSLDN LVIIYDSNNI 
TIEGDTSIAW CEDVKVRFEA AGFEVARIDG HNYDEIEFAL CEADTKEKPY LIIASTKIAK 
GAGDLEGSHH AHGAPLGEEI IKQAKIEAGF DPQKQFFVDD DVLFKFRSAV ELGDLANAQW 
DKLVSELPNE KKELLNTLLN PDFSKIDFPN LKGEKLATRD SNGKILNALA AALPGFIGGS 
ADLAPSNKTE LKGFGDFPRG KNMHFGIREH AMGAICNAYA RYGLFLPFSA TFFIFSDYLK 
ASARIAALMG IKHFFVWTHD SIGVGEDGPT HEPIEQLSTF RAMPNFYSFR PADGNENVEC 
WKTALNLNAP SAFVCSRQAL PPLDEPKFGD VKNGAYLLKQ ASNPKITLVA SGSEVGLCLE 
AASILDSEGI ATNVVSAPCF DLLLEQDADY VNTIFNPSTK VLAVEAASAL EWYKYADDVL 
GMRTFGASAP ANELFKYFGF TATNVANRAK NLL