| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0067 |
|---|
| Symbol | |
|---|
| ID | 4537757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 52765 |
|---|
| End bp | 53841 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639745465 |
|---|
| Product | PDZ domain-containing protein |
|---|
| Protein accession | YP_891277 |
|---|
| Protein GI | 118474184 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.618019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TATGCTCATT TTTACTGCTA TTTTTAGCTA TTTTTGCTTA CAGCGCACCT
AAGCCGACTC CTGAAGACGT AGATGCGATA TATCAAAAAA ACAAAGATTC TCAGTTTAAC
TATAAAGGCA ATATCGCAGT TGCATTAAAT GCGGATCTTG CTGCTGTTAT TTATGATAAA
AACAATAAAT TAGATAGTAA GGATTATATT AAATTTGATC CGTACTTAGG GCTTTATCTT
ATCAAATCCC AAAATACTTT AAGAGCTTCA TTTATGATAG ATGAGCTAGA TAGCAAAGAA
GATATGTGGG TTATGATTTT AGATAAAAAC TCTACTGAAA TGGGGCATAT AAAGAGTTTT
GCAAAAGATA TAGGCGAACT CGACGAGCTT AGTTATAACG CTAGCAAAGC CGGACTTTTA
GTTTGCGATT GCGGTACTAT GGTCGGTATA GGCGTTGGAG GAAATAAATT TATAGGAAAT
AGATACATAA AACATTTTAT GAAATATAGC GATGTATATT ACGGCGATAT AGGCGTGACT
TTTAGTGATG ATAACGGAAC TATAACAGTA AAAAGCGCAA ATCCTTTTGG AGCAGGAAAA
GAGCTTTTAA CAGGAGATAC TATAGTATCT GTAAATTCAA AAGTACCAAA TAATCTAAGA
GAAATAAACG AGATGATTTT GTTTGCTCCA AAAGATGCGG TGTTGAAATT TGATATTAAC
AGAGATGGTA AAAACCAGTC TTATAGCATC AAGATGTCAA ATTTGCCAAA TAAAATTATG
AATTCTTCCG ATGATAATAA AACATCCTCG CTCAAAGCCA AAAAACCTGT TAAAAAGCGT
ACTTTTTTAA GTCAGTACGG TATAACTTTA AATCCGAATT TAACTATAAA AAGTGTAGCT
CGAAACTCAA AAGCGTATAA AGCCGGTTTT AGGAACGGAG ATAAAATAAT GCAGATTGAT
AAAAAACAAC TGAATTCCTC AGCCGATATA GAAAAAATAA TGTCTGCAAA AAATGGTGCT
TTTTATTATC TAGTTTCGCG TGATGATTTT CAGTTTTTTG TGAAAGTTTA TAGATGA
|
|---|
| Protein sequence | MKKLCSFLLL FLAIFAYSAP KPTPEDVDAI YQKNKDSQFN YKGNIAVALN ADLAAVIYDK
NNKLDSKDYI KFDPYLGLYL IKSQNTLRAS FMIDELDSKE DMWVMILDKN STEMGHIKSF
AKDIGELDEL SYNASKAGLL VCDCGTMVGI GVGGNKFIGN RYIKHFMKYS DVYYGDIGVT
FSDDNGTITV KSANPFGAGK ELLTGDTIVS VNSKVPNNLR EINEMILFAP KDAVLKFDIN
RDGKNQSYSI KMSNLPNKIM NSSDDNKTSS LKAKKPVKKR TFLSQYGITL NPNLTIKSVA
RNSKAYKAGF RNGDKIMQID KKQLNSSADI EKIMSAKNGA FYYLVSRDDF QFFVKVYR
|
|---|
| |