Gene CFF8240_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_0059 
SymbolrpoA 
ID4539118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand+ 
Start bp46213 
End bp47211 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content35% 
IMG OID639745457 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_891269 
Protein GI118475267 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTACAACATC AGCTTATATG CCAACTGAGA TTGAGGTTGT TAATGTGAGT 
GAGAATGTAG CTAAGATTAT AGCATATCCG TTTGAGACAG GCTACGCTGT AACTTTGGCT 
CATCCGCTTC GCCGATTACT TTATACTAGC ACGGTTGGAT TTGCTCCGAC TGCTGTTAAG 
ATAGATGGCG TAGCTCATGA ATTTGATAGT ATGCGCGGTA TGCTTGAAGA TGTTACGCTA 
TTTATTATAA ATTTAAAAAA CTTACGTTTT AAGCTCAAAA ATGACTCAAA ACGTGAAGTC 
ATAGAGTATA GCTTTAAAGG GCCAAAAGAG ATAACCGGAA TTGATTTAAA CAATGATATA 
GTTGAGATTG TAAATCCGGA TTCTTACCTT GCTACCATAA ACGAAGATGC TGAGCTTAAG 
TTTAGCCTTA TAGTAGAAAA AGGTATTGGA TATGTGCCTA GCGAAGAGAT CAGGGATTAT 
ATAGATAGCG AGTATATAGC GCTTGATGCT TTCTTTACTC CTGTTAAAAA AGCGGTTTAT 
GAGATAGAAA ATGTTTTGGT TGAAGACAAT CCAGACTATG AAAAGATCGT TTTAACAGTG 
ACAACAGATG GTCAAGTAAG TCCTATAGAA GCGTTTAAAC ACTCAATAGA GGCTATGTAC 
AAGCAGATGT CTATATTTAA TAATGTTCTA AATATAGATG TAAATATGGC ATTAACTTCA 
AGTCAAAACT CAAATGAGCA TTCAAAATTG CTTGAAAGCG TTGAGAATTT AAATTTAAGT 
GCTAGAAGTT TTAACTGTCT TGACAAAGCC GATATACGCT ATATAGGTGA GCTTGCTCTT 
ATGGAAGAGA GTGAGTTGAA AGATCTCAAA AATTTAGGTA AAAAATCTCT TGATGAGATA 
AAAGCTGTAA TGGCAGAAAT CGGCTATCCG TTTGGTGAAA ATACATTAGG TGATAGTAAA 
GAAGCGCTCA GAAAAAAGAT ATCTGAGTTA AAATCATAA
 
Protein sequence
MKKITTSAYM PTEIEVVNVS ENVAKIIAYP FETGYAVTLA HPLRRLLYTS TVGFAPTAVK 
IDGVAHEFDS MRGMLEDVTL FIINLKNLRF KLKNDSKREV IEYSFKGPKE ITGIDLNNDI 
VEIVNPDSYL ATINEDAELK FSLIVEKGIG YVPSEEIRDY IDSEYIALDA FFTPVKKAVY 
EIENVLVEDN PDYEKIVLTV TTDGQVSPIE AFKHSIEAMY KQMSIFNNVL NIDVNMALTS 
SQNSNEHSKL LESVENLNLS ARSFNCLDKA DIRYIGELAL MEESELKDLK NLGKKSLDEI 
KAVMAEIGYP FGENTLGDSK EALRKKISEL KS