Gene CFF8240_0049 details

Gene Information

• Locus tag: CFF8240_0049
• Symbol: rplF
• ID: 4538164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 40239
• End bp: 40775
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 639745447
• Product: 50S ribosomal protein L6
• Protein accession: YP_891259
• Protein GI: 118475079
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.560841
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TTGGAAAACA ACCGATATCT ATCCCAAATG GTTTAGATGT TAGTTTAAAA 
GGTAGTGTTT TGGTTTTTAA AAAAGGCAAC AACACTAAAG AGCTAGATAC TAAAGGTAAT 
GTTAATATCG AAGTTAAAGA CGGAAATATC ATATTTACAA GTAAAGGCGA TGATAGACAA 
AGCAGGGCTT ATTGGGGAAC TTATAGAGCT TTAGCGAACA ACGTTGTTGT TGGTCTAACT 
ACTGGATTTA CAAAACAACT TGAGATAAAC GGTGTCGGTT ATAAAGCAGC TGCAAAAGGT 
AAAGTTTTAG AGCTTGCGCT CGGTTTTTCT CACCCTATAA ATTATGAACT TCCAGAAGGC 
ATAGAGATAA GCGTGGAAAA AAATATTATC ACTATCAAAG GAAGCGATAA ACAAGTTGTT 
GGTCAAGTAG CAGCAGAAGT TAGAGGATTT AGACCGCCAG AACCATATAA AGGTAAAGGT 
GTTAAATACG CCGAAGAGCG CATAATCCGC AAAGCCGGCA AAACATCTAA GAAATAA 

 

Protein sequence

MSRIGKQPIS IPNGLDVSLK GSVLVFKKGN NTKELDTKGN VNIEVKDGNI IFTSKGDDRQ 
SRAYWGTYRA LANNVVVGLT TGFTKQLEIN GVGYKAAAKG KVLELALGFS HPINYELPEG 
IEISVEKNII TIKGSDKQVV GQVAAEVRGF RPPEPYKGKG VKYAEERIIR KAGKTSKK