Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0040 |
Symbol | rpsC |
ID | 4538999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 36812 |
End bp | 37510 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639745438 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_891250 |
Protein GI | 118474301 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0666312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAAA AAGTTAATCC AATAGGCCTT AGACTAGGTA TCAATAGAAA CTGGGAGTCT AGATGGTTTC CATCGAAAGC GACTTTACCA GAAAATATAG GCGAAGACTA TAAAATAAGA AAATTCCTAA AAACTAAGTT ATATTATGCT GGTGTTAGTC AAATTCTTGT TGAAAGAACA GCTAAAAAAC TTCGCGTTAC CGTAGTTGCG GCTCGTCCAG GAATCATAAT AGGTAAAAAG GGCGGAGAGA TTGAAAATTT GAGATCTGAG GTTACAAAAC TTGTAAATAA AGATATCGCT ATCAATATCA AAGAAGAGAG AAAAGCAGGA AGTTCAGCTC AATTGGCAGC AGAAAACGTA GCTATGCAGC TTGAGCGTCG TGTTGCTTTC CGTCGCGCTA TGAAAAAAGT TATCCAAGGT GCCCAAAAAG CTGGTGCCAA AGGTATCAAA GTTTCAGTTG CTGGTCGTTT AGGCGGAGCT GAAATGGCTA GAACAGAGTG GTATTTGGAG GGTCGTGTGC CGCTTCATAC GCTAAGAGCT AGAATAGATT ACGGCTTTGC AGAAGCCCAT ACTACTTATG GTAACATAGG TGTTAAAGTT TGGATCTTTA AAGGCGAAGT ACTTCAAAAA GGTATTCAAG CCGATAAAAA TGAAGATACA TCACCAAAAA AACCAAGACG TGCTAGAAGG GGTAAATAG
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Protein sequence | MGQKVNPIGL RLGINRNWES RWFPSKATLP ENIGEDYKIR KFLKTKLYYA GVSQILVERT AKKLRVTVVA ARPGIIIGKK GGEIENLRSE VTKLVNKDIA INIKEERKAG SSAQLAAENV AMQLERRVAF RRAMKKVIQG AQKAGAKGIK VSVAGRLGGA EMARTEWYLE GRVPLHTLRA RIDYGFAEAH TTYGNIGVKV WIFKGEVLQK GIQADKNEDT SPKKPRRARR GK
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