Gene CFF8240_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_0040 
SymbolrpsC 
ID4538999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand
Start bp36812 
End bp37510 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content40% 
IMG OID639745438 
Product30S ribosomal protein S3 
Protein accessionYP_891250 
Protein GI118474301 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0666312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAAA AAGTTAATCC AATAGGCCTT AGACTAGGTA TCAATAGAAA CTGGGAGTCT 
AGATGGTTTC CATCGAAAGC GACTTTACCA GAAAATATAG GCGAAGACTA TAAAATAAGA
AAATTCCTAA AAACTAAGTT ATATTATGCT GGTGTTAGTC AAATTCTTGT TGAAAGAACA
GCTAAAAAAC TTCGCGTTAC CGTAGTTGCG GCTCGTCCAG GAATCATAAT AGGTAAAAAG
GGCGGAGAGA TTGAAAATTT GAGATCTGAG GTTACAAAAC TTGTAAATAA AGATATCGCT
ATCAATATCA AAGAAGAGAG AAAAGCAGGA AGTTCAGCTC AATTGGCAGC AGAAAACGTA
GCTATGCAGC TTGAGCGTCG TGTTGCTTTC CGTCGCGCTA TGAAAAAAGT TATCCAAGGT
GCCCAAAAAG CTGGTGCCAA AGGTATCAAA GTTTCAGTTG CTGGTCGTTT AGGCGGAGCT
GAAATGGCTA GAACAGAGTG GTATTTGGAG GGTCGTGTGC CGCTTCATAC GCTAAGAGCT
AGAATAGATT ACGGCTTTGC AGAAGCCCAT ACTACTTATG GTAACATAGG TGTTAAAGTT
TGGATCTTTA AAGGCGAAGT ACTTCAAAAA GGTATTCAAG CCGATAAAAA TGAAGATACA
TCACCAAAAA AACCAAGACG TGCTAGAAGG GGTAAATAG
 
Protein sequence
MGQKVNPIGL RLGINRNWES RWFPSKATLP ENIGEDYKIR KFLKTKLYYA GVSQILVERT 
AKKLRVTVVA ARPGIIIGKK GGEIENLRSE VTKLVNKDIA INIKEERKAG SSAQLAAENV
AMQLERRVAF RRAMKKVIQG AQKAGAKGIK VSVAGRLGGA EMARTEWYLE GRVPLHTLRA
RIDYGFAEAH TTYGNIGVKV WIFKGEVLQK GIQADKNEDT SPKKPRRARR GK