| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0031 |
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| Symbol | pcm |
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| ID | 4538492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 31739 |
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| End bp | 32368 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639745429 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_891241 |
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| Protein GI | 118475384 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000116097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGTT TAGAGCGTGC CAGATGTCAA AAAATGGCTG ATGATATAGC CGATGTTATA
GAGCTGACGC CTATGGTTTA TAAGGCGTTT TGTAGTACTC CACGTACGGA TTTTGTTCCG
GTTTCGATCA ATGCTTTTAA GTTAGATGCT CATCCGATTG GAGGCAATCA ATGGATTAGT
TCGCCTCTAA CAGTAGCTAA AATGACACTT GCTTTGGAAG CTGAAAATTG CGATAATATA
CTTGAGATCG GTTGCGGAAG CGGATATCAA GCTGCAATTT TAAGTATGCT TGCTCACAGA
ATTTTTAGTA TTGAGCGTAT AGAAAAACTT GCAAATGAAG CTAAGCTAAA GATGAAAAAA
CTCGGTTTTA ATAATGTAAA TATAAGATAT GACGATGGAA ACGTAGGCTG GAAAAGTTAC
GCTCCATATG ATAGAATAAT ACTTAGCTGC GCTTGTTTAG GTGTTCCGAC TAGGCTTTTT
GAGCAGTTAA AAGATGGCGG AATTTTAGTA GCTCCTATTA AAGAAAATAG TAAACAATTT
ATAGTTAAAT TTAAAAAAAA TGGCTCAAAT TTAGAAAAAA TAGTTCTTGA TGAGTGTGAG
TTTGTTCCTT TATTAGATGG TAGAGAGTAG
|
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| Protein sequence | MDSLERARCQ KMADDIADVI ELTPMVYKAF CSTPRTDFVP VSINAFKLDA HPIGGNQWIS
SPLTVAKMTL ALEAENCDNI LEIGCGSGYQ AAILSMLAHR IFSIERIEKL ANEAKLKMKK
LGFNNVNIRY DDGNVGWKSY APYDRIILSC ACLGVPTRLF EQLKDGGILV APIKENSKQF
IVKFKKNGSN LEKIVLDECE FVPLLDGRE
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