| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0021 |
|---|
| Symbol | nrdD |
|---|
| ID | 4538094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 22265 |
|---|
| End bp | 24334 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639745419 |
|---|
| Product | anaerobic ribonucleoside triphosphate reductase |
|---|
| Protein accession | YP_891231 |
|---|
| Protein GI | 118474565 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGATAA TTAAACGCGA TGGAAGTTTG CAAGATTTTG CAAGTTATAA AATAGAAAAT
GCGATAACAA AAGCTTATAA AAGTGCTCTT AAAGAACCAA ATACAGCGCT TATCAAAAAA
GTATTGTCTG AGGTAAAAGA CAAAATGAGC GTAGAAGAAA TTCAAGATAT TATAGAAAAA
GCTCTTTTTG ATAGCGGTGA TTTTACAGTA ATGCGAAATT TTATGCTTTA TCGTCATACT
CATACTATGC AAAGAGACGG TGAGCTTGAC GAAAGAACGA CTTATATAAA CTCGACTCAA
ACTATAGAAG AGTATATCGG AAAGTCTGAT TGGCGTATTA TGGCAAACTC AAATACGAGT
TATTCAAACG CCGGACTTAT CAATAACACC GCTGGAAAAG TCATTGCAAA TTATTGGTTA
GATGCTGTTT ATAGCGATCA TGAAGGAGCG GCTCATAGAA ACGGAGATTA TCATATACAT
GACCTTGATT GTTTGACTGG ATACTGTGCT GGTTGGAGTC TTAGAGCCTT GTTAAATGAA
GGATTTAACG GTGTTAGAGG CAGGGTCGAG AGCAGAGCGC CGAGTCATTT TAGAGAGGCT
TTATCTCAAA TGGCGAACTT TTTGGGAATT TTGCAAAGCG AATGGGCTGG AGCGCAAGCA
TTTAGTAGCT TTGATACATA TCTTGCGCCG TATGTTTTTA AAGATCGATT AAGCGATATA
GAAATCAAAA AAGCTCTTAC TAGCTTTATT TTCAATCTAA ATGTGCCGGC ACGTTGGGGT
CAAAGTCCAT TTACGAATGT TACTATAGAT ATAACTCCGC CAAGCGATCT TGCCGATCAA
ATTCCTACAA AAAACAATGA GCATCTATTT TTAAATTTAA AAGATAACGA ACTTGAAAAA
CTTTGCAAAC AACGCGGTAA AAATAGTTTA AAAGATATGA CTTACTCGGA TTTTAAACCT
GAAATGGATA GGATAAATAT AGCATTTTAT GATATTTTAA CTACCGGAGA TAAGTGTTCG
CAGCCATTTA CGTTTCCTAT ACCAACTGTA AATTTGACTG AGGATTTTAA GTGGGATAGC
TCTGTGGCTA AAAAGATATT TGAAAATACC GCAAAAATGG GTTCGAGTTA TTTTCAAAAT
TTTATCGGAA GTCAATATAC GACAGATGAA AACGGCAATA AAATACCGAA TGAAAAAGCT
TATAAACCGG GTGCCGTTCG CTCTATGTGC TGTAGGCTTC AGCTGGATTT AAGGGAGCTT
TTAAAACGCG GGGGAGGGCT TTTTGGAAGT GCCGAGATGA CCGGAAGTAT CGGCGTAGTT
ACTATAAATT TAGCGCGCCT AGGATATCTG TTTAAAGGTG ATAAAAGTGC ATTTTATGCA
AGACTTGATG AACTGCTAGA GTTGGCAAAA AGTACTCTTG AAAAGAAGCG TAAATTTATA
AATGAGATGT ATCAAAGGGG ACTTTATCCA TATACCGCTA GATATCTTAG AAATTTTAAT
AACCATTTTA GTACAATAGG AATAAACGGC GCAAATGAGA TGATACGCAA TTTCACTGAT
GATAAAGAAA ATATAACGAC CAAATTCGGT ATAGGGTTTA CAAAAGAACT TATAGAATAT
CTAAGAGCTA AAATGATAGA GTTTCAAAGA ACTACCGGAA ATTTATATAA TCTTGAAGCG
ACTCCTGCTG AAGGAACAAC TTATCGCTTT GCTAAAGAAG ATAAAAAACG TTATCCAGAC
ATCATTCAAG CTGGATTTGA TGATAAGGTG TATTATACAA ACTCTACTCA GCTTCCGGCT
GATTTCGGCG ATGATCCTTT CGAGGCTTTA AATTTGCAAG ATGAACTTCA AAGCAGTTAT
ACGGGTGGAA CTGTTTTTCA CCTTTATATG CGTGAAAAAC TAAGCAGTAC AAAGGCTTGT
CAGCATTTAG TGAAAAATAT AGTGGAGAAT TATAAACTTC CATATATTAC GATAACTCCC
GTGTTTAGCG TGTGTCCAAA ACACGGGTAT ATCGCAGGCG AGCATGAGTA TTGTCCAAAA
TGCGATGAGG AGATTTTGAA TTTGGCCTAA
|
|---|
| Protein sequence | MKIIKRDGSL QDFASYKIEN AITKAYKSAL KEPNTALIKK VLSEVKDKMS VEEIQDIIEK
ALFDSGDFTV MRNFMLYRHT HTMQRDGELD ERTTYINSTQ TIEEYIGKSD WRIMANSNTS
YSNAGLINNT AGKVIANYWL DAVYSDHEGA AHRNGDYHIH DLDCLTGYCA GWSLRALLNE
GFNGVRGRVE SRAPSHFREA LSQMANFLGI LQSEWAGAQA FSSFDTYLAP YVFKDRLSDI
EIKKALTSFI FNLNVPARWG QSPFTNVTID ITPPSDLADQ IPTKNNEHLF LNLKDNELEK
LCKQRGKNSL KDMTYSDFKP EMDRINIAFY DILTTGDKCS QPFTFPIPTV NLTEDFKWDS
SVAKKIFENT AKMGSSYFQN FIGSQYTTDE NGNKIPNEKA YKPGAVRSMC CRLQLDLREL
LKRGGGLFGS AEMTGSIGVV TINLARLGYL FKGDKSAFYA RLDELLELAK STLEKKRKFI
NEMYQRGLYP YTARYLRNFN NHFSTIGING ANEMIRNFTD DKENITTKFG IGFTKELIEY
LRAKMIEFQR TTGNLYNLEA TPAEGTTYRF AKEDKKRYPD IIQAGFDDKV YYTNSTQLPA
DFGDDPFEAL NLQDELQSSY TGGTVFHLYM REKLSSTKAC QHLVKNIVEN YKLPYITITP
VFSVCPKHGY IAGEHEYCPK CDEEILNLA
|
|---|
| |