Gene CFF8240_0013 details

Gene Information

• Locus tag: CFF8240_0013
• Symbol: typA
• ID: 4537988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 14014
• End bp: 15822
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639745411
• Product: GTP-binding protein TypA/BipA
• Protein accession: YP_891223
• Protein GI: 118474951
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAAAGA TAAGAAATAT TGCAGTTATC GCCCACGTTG ACCACGGTAA AACTACTATG 
GTCGATGAAC TCCTAAAACA ATCAGGAACT TTTACCGAGC ATCAAGCAGT AGGTGAGAGG 
GTGATGGATA GCAATGATAT TGAGCGTGAG CGTGGAATTA CAATTCTTAG TAAAAATACA 
GCGATTCGTT ATAAAGATCA TAAAATAAAC ATTATAGATA CTCCAGGACA CGCCGATTTC 
GGCGGTGAAG TTGAGCGTGT TTTAAAGATG GTAGATGGTG TTTTGCTTCT TGTAGATGCA 
CAAGAAGGCG TTATGCCTCA AACTAAATTC GTCGTAAAAA AAGCTCTTAG CTTAGGTCTT 
CGTCCGATAG TCGTTATAAA CAAAATCGAC AAACCAGCAG CAGATCCAGA CAGGGTTATA 
AACGAAATTT TCGATCTATT CGTCGCACTT GACGCGACTG ATGAACAGCT GGAATTTCCG 
GTAGTTTACG CCGCTGCTAA AAACGGTTAC GCAAAGCTTA AACTTGATGA TGAAAACGTA 
GATATGAAAC CGCTTTTTGA GACTATCTTA GCTCATGTTC CAGAGCCAAC TGGAAAAGAC 
GACAATCCTC TTCAACTCCA AGTTTTTACT CTAGATTACG ATAATTACGT CGGCAAGATC 
GGCATCGCTC GTATATTTAA CGGTAAAATC AGTAAAAATC AAAACGTTAT GCTAGCAAAG 
GCTGATGGTA CAAAAACAAC TGGACGCATA AGCAAACTTA TCGGATTTTT CGGACTTGAT 
AGAATGGATA TAAACGAAGC AGGAACCGGT GATATCGTGG CTATCGCGGG ATTTGAGACG 
CTTGATGTGG GCGATAGCGT TGTCGATCCA AATAATCCTA TGCCGCTTGA CCCGCTCCAT 
ATCGAAGAGC CGACACTTAG CGTCGTATTT AGCGTAAATG ACTCTCCATT AGCCGGAACA 
GAAGGCAAAT TCGTCACTTC AAATAAGATA GATGAGCGCT TAGAGAGCGA AATGAAGACA 
AATATCGCTA TGAAATACGA AAATATAGGC GAGGGTAAAT TTAAAGTAAG CGGTCGTGGT 
GAATTGCAGA TCACTATTTT GGCTGAAAAT ATGCGTAGAG AAGGCTTTGA GTTCTGTCTT 
GGTAGACCTG AAGTTATCAT AAAAGTTATA GACGGCGTAA GATGTGAACC TTATGAACTT 
CTTGTTATCG ACTCCCCAGA TGATTGTACT GGAACCGTTA TCGAAAAATT AGGCAAAAGA 
AAAGCCGAAA TGGTAAGTAT GAATCCAACT GGAGACGGAC AAACTAGAAT CGAGTTTGAG 
ATACCTGCGC GCGGCCTTAT CGGCTTTAGA AGCCAGTTCT TAACTGATAC CAAAGGCGAG 
GGTGTTATGA ACCATAGCTT TTTGGAATTC CGTCCATTAA GCGGTTCGGT AGAACATAGA 
AGTAACGGCG CTTTAGTTAG TATGGAAAGC GGCGTGGCTT TGGCGTATTC GCTATTTAAT 
TTGCAAGATA GAGGTATTTT ATTTTGCGAT CCTCAAACCA AAGTTTATGT TGGCATGATC 
ATCGGTGAAC ATAGTCGTCC AAATGATCTT GACGTCAATC CTATAAAAGG TAAAAACTTA 
ACAAACGTAC GCGCAAGCGG AAGTGATGAC GCTATAAAAC TAGTTCCGCC GCGCAAACAT 
AGCTTAGAGC GCGCTCTTGA GTGGATAGAA GAAGACGAAC TTGTAGAAGT AACTCCTATA 
AGTATCCGTA TCCGCAAACG CTACCTTGAT CCAACCATGA GAAAAAGAAT GGCGAAATCT 
AAAGAATAA 

 

Protein sequence

MEKIRNIAVI AHVDHGKTTM VDELLKQSGT FTEHQAVGER VMDSNDIERE RGITILSKNT 
AIRYKDHKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL 
RPIVVINKID KPAADPDRVI NEIFDLFVAL DATDEQLEFP VVYAAAKNGY AKLKLDDENV 
DMKPLFETIL AHVPEPTGKD DNPLQLQVFT LDYDNYVGKI GIARIFNGKI SKNQNVMLAK 
ADGTKTTGRI SKLIGFFGLD RMDINEAGTG DIVAIAGFET LDVGDSVVDP NNPMPLDPLH 
IEEPTLSVVF SVNDSPLAGT EGKFVTSNKI DERLESEMKT NIAMKYENIG EGKFKVSGRG 
ELQITILAEN MRREGFEFCL GRPEVIIKVI DGVRCEPYEL LVIDSPDDCT GTVIEKLGKR 
KAEMVSMNPT GDGQTRIEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPLSGSVEHR 
SNGALVSMES GVALAYSLFN LQDRGILFCD PQTKVYVGMI IGEHSRPNDL DVNPIKGKNL 
TNVRASGSDD AIKLVPPRKH SLERALEWIE EDELVEVTPI SIRIRKRYLD PTMRKRMAKS 
KE