Gene Acel_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2142 
Symbol 
ID4485610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2424270 
End bp2425949 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content67% 
IMG OID639730944 
Productintegral membrane protein MviN 
Protein accessionYP_873900 
Protein GI117929349 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCC CGCACCGCGC CGCCGGGACC ATTCGCCCGG GACATGCCGA GCGTTCCGTG 
GACAGCGGAC TGGTCGCCGC AAGCGGGGTC ATGGCCCTCG GAACTCTCGC CTCCCGGGTC
ACCGGCTTTC TGCGGACCGC GGTGCTCGCC GCGGCGCTCG GCTCACAGCA GCTCGCCGAC
GCCTACAACG TCCCGAACGC GGCGCCCAAT GCGCTGTACG ACCTGTTGCT TGGGGGCGTT
CTGACGAGCG TCGTCGTTCC GTTGCTCGTT CGCGCCGCCA AAGAAGATTC GGACAGCGGA
GTAGCGTACG CCCAGCGGTT CCTCACTCTT GTCGCGGTCT TTCTCGGCGC GTGCACGGTA
TGTGCCGTCC TCGCCGCGCC TTGGATCATC GACGTCTATG CGAACCGGTT GTCCGGGCAG
CAGCGCGACC TGGCAATCGT CTTCGCCCGG TATTTCTTGC CGCAGATTTT CTTCTACGGC
CTGAGCGCCA CGATCGGAGC CATTCTCAAC AGCCGCGGCA AATTCGCCGC TCCGATGTGG
ACTCCTGTCA TCAACAATGT CGTGCTCATC ATTACCGGAC TGCTATTTTT GGCGATGAAC
TCGGGTCACG CCACGGTGAA TCTCACCACG GGGGAACAAG TGCTGCTTGG CGTGGGCACC
ACCGGGGGTA TCGTTGCGCA GACGCTGGCG CTCTGGCCGT CGCTGCGGGC GACGGGATTT
CGGTGGCGTC CGCGGTTCGA CTGGTGGGGC ATGGGCCTTG CGGAGATCGC TCGGCTCGCC
GGGTGGGTCG TCGTCTACGT TGTCGTCAAC CAAATTGGTT TTGCCGTCGT CACCAATCTG
GCGAGCGCTG CAGGCCGGGT CGCCGCTGCA CACCACATTT CGCACGGGGA CAGCTACGCC
GCATACGCGT ACGCCTATCA GATTTTTCAA CTGCCGTACG CCATCGTCGC GGTTTCCGTC
ATCACCGCAC TGCTGCCGCG GATGAGCGCA CACGCCGTCG ACCGGCGCAC CGCGGAGGTC
CGGCGCGACC TTTCCGTCGG GCTCCGGCTC TCCGGCGTCG CCGTCGTCCC CGCGGCAATC
GCATTCATCG CACTGGCGCC GGAAATCACC GGAATCATCT TCGCGCACGG CAACACGTCC
GCCGCCGACG CACGCTACAT CGGCTGGCTG CTCGTCGCCT TTGCCACCGG ACTCGTCCCG
TTCTGCCTCT TTCAGCTGTT CACCCGGGTG TTCTACGCCC TGCGCGACAC CCGGACACCG
GCGCTCATCA ACCTCCTCGC CACCGCCGCC AACATCGCCG CGGACGTCGT GTTATACGTC
GTCCTGCCGC CCGGCAGCCG CGCGATCGGG CTGGCCGCCG GGTTCTCCCT CTCCTACTGG
ATCGCGTGCG CCCTGCTCGG CCGGGCCGCG AGGGTCCGGC TCGGTGGCGT GGACGGCCGC
CGGGTCACCC GAACCTACGT CCGCCTTGTC GTCGCCGGCA CAATCGCCGG CATCGTCGCC
TTCAGCCTTG CACGGTTGGT CCACCTCCTG CTCGGCACCG GCCTGGCACC GGATGTCGTA
GCGATCGTCG CCGGCGGGGG CATCGGCGCC GGAATCTTCG GGGCCCTCCT GGTGCGCATG
CGGGTGTCGG AGGCCGGCGA GTTGCTCGCC GCGGTGCGCG CGCGGTTCGG CTCGAGCTGA
 
Protein sequence
MTGPHRAAGT IRPGHAERSV DSGLVAASGV MALGTLASRV TGFLRTAVLA AALGSQQLAD 
AYNVPNAAPN ALYDLLLGGV LTSVVVPLLV RAAKEDSDSG VAYAQRFLTL VAVFLGACTV
CAVLAAPWII DVYANRLSGQ QRDLAIVFAR YFLPQIFFYG LSATIGAILN SRGKFAAPMW
TPVINNVVLI ITGLLFLAMN SGHATVNLTT GEQVLLGVGT TGGIVAQTLA LWPSLRATGF
RWRPRFDWWG MGLAEIARLA GWVVVYVVVN QIGFAVVTNL ASAAGRVAAA HHISHGDSYA
AYAYAYQIFQ LPYAIVAVSV ITALLPRMSA HAVDRRTAEV RRDLSVGLRL SGVAVVPAAI
AFIALAPEIT GIIFAHGNTS AADARYIGWL LVAFATGLVP FCLFQLFTRV FYALRDTRTP
ALINLLATAA NIAADVVLYV VLPPGSRAIG LAAGFSLSYW IACALLGRAA RVRLGGVDGR
RVTRTYVRLV VAGTIAGIVA FSLARLVHLL LGTGLAPDVV AIVAGGGIGA GIFGALLVRM
RVSEAGELLA AVRARFGSS