Gene Acel_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2134 
Symbol 
ID4486453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2413206 
End bp2414663 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content65% 
IMG OID639730936 
Producttransmembrane protein 
Protein accessionYP_873892 
Protein GI117929341 
COG category[S] Function unknown 
COG ID[COG5650] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCGC CTCTCCCGAC AGAGATCGCC GCGCCGACGT TGGAAGACCC GGTCGTTCGC 
GGCGCGAGCT ATGCCTTCGG CGGACCGCTC GGCCGGCACG CCCTTCTCGG CAGCTCGTGG
TGGACGCCGA TCCGGGTTCT CATCGTCTTC GTCCTTGCGG CGTCCGGGCT GATGTACGCC
CAGAAGCTCC CCTGCCGGAA CGCCGCGTGG AGCAATGGCT TCCAGTACAG CCACGTGTGT
TACACCGACA TTTTTCCGCT CTACTACTCC GAAGGACTGG CCCAAGGAAA GCGGCCGTAT
CTGGACGCAC ATCCGGACGC CAACGGAAAA CCGACCTACG TCGAATACCC GGTGCTGATC
GGCGCGACGA TGCAGGTGAC CGCTTCGCTC GCGAAGCATC CGATCACCCC GAAATCCACG
CCCGGTCAGC GGTTTCTCGA CGCCAACTGG TTCATTCTCG CGATTGCGGC TCTCATCACC
GTTGTCGCGA CGGCATTGAC GAATCGACGC CGTCCGTGGG ACGCCGCGAT GGTAGCCCTC
GCCCCTGGGC TGATTCTCGC CGGCTTGATC AACTGGGATC TCATTGCGGT CGCATTCAGC
GCGTTGGCTT TTTATGCCTG GTCCCGCCGC CATCCGGCGA TCGCCGGCCT GCTCTTTGGT
CTCGGCATTG CCACAAAGTT CTACCCGATC ATCTTCTTCC TGCCGCTCTT CCTCCTCTGC
CTGCGGGCAA AGCGACTGGG TGCGTTCTTC GCCTGCCTCG GCGGCGCCGC CTTCTCCTGG
GCATTGGTTG ACGTGCCGAT ATGGCTGAAA TCACCGGAAG GTTTCGCGAC GTTTTACCGG
TTCAACGCGG AGCGCGGTCC GGATTGGGGT TCGATCTGGT ATGCGATCGA GCAAATCCGC
GGCATCGGCT ACACCACCCG GCAGGTCAAT CTCGTCGAAG CAGTCGCCAC GGTGGTCGTC
GTCCTCATCG TCGCGGTTAT TGCCTTCAGT ACGCCGCGCC GACCCCGGTT GGCGTCGCTG
GCCTTTGTGA CGCTGGCGCT CTTCCTGCTG GTCAACAAGG TGTACTCCCC CCAGTACGTG
CTCTGGCTGC TCCCGCTCGC GGTGCTCGCG CGGCCGCGGT GGCCGTCGTT CCTGGTGTGG
CAGTTCGGCG AGGTGCTGTA CTTCCTCGCG ATCTGGCTGT ACCTGCTCAA CGTGGAACGG
CCCGGCAAGG GGCTCGAGTG GCAGCCGTAC CTCGTCGGCC TGGCGATCCG CGACCTCGCC
GTTCTCTTCC TCTGTGTGCT CGTCACCGTC GAGATGTTCA AACCGGAACG CGACATCGTC
CGCCGTGACG GGAGTGACGA CCCCGCCGGC GGCGTACTCG ACGGTGCGCC GGACTGGCTG
GCGCCCCGGA GCACCGTTGC CGCCCAGCCG GCGGTGCCGG CGGGAGCCGC GGCGGAGTTC
CGGCTTGCAC CCGGGTGA
 
Protein sequence
MDAPLPTEIA APTLEDPVVR GASYAFGGPL GRHALLGSSW WTPIRVLIVF VLAASGLMYA 
QKLPCRNAAW SNGFQYSHVC YTDIFPLYYS EGLAQGKRPY LDAHPDANGK PTYVEYPVLI
GATMQVTASL AKHPITPKST PGQRFLDANW FILAIAALIT VVATALTNRR RPWDAAMVAL
APGLILAGLI NWDLIAVAFS ALAFYAWSRR HPAIAGLLFG LGIATKFYPI IFFLPLFLLC
LRAKRLGAFF ACLGGAAFSW ALVDVPIWLK SPEGFATFYR FNAERGPDWG SIWYAIEQIR
GIGYTTRQVN LVEAVATVVV VLIVAVIAFS TPRRPRLASL AFVTLALFLL VNKVYSPQYV
LWLLPLAVLA RPRWPSFLVW QFGEVLYFLA IWLYLLNVER PGKGLEWQPY LVGLAIRDLA
VLFLCVLVTV EMFKPERDIV RRDGSDDPAG GVLDGAPDWL APRSTVAAQP AVPAGAAAEF
RLAPG