Gene Acel_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2116 
Symbol 
ID4484970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2395587 
End bp2396390 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID639730918 
ProductGrpE protein 
Protein accessionYP_873874 
Protein GI117929323 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0346149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC GTGAGGAGCC TGTCATTCGC GACAAGCGGC GTGTGAGATT CGATCCGCTG 
CTCGGTGCCG TCCCCGGCGG GACGGCACCG GGTGAGGCGG CGCATGCGGC GTCGGCGCCC
GCGGCGCACA GTGCGGACGC CGCGTCGACG CACCCCACCG GCGGGTCGGC GCCGGCGGCG
GACGCCGGTC TGCCGTCGCC TGACGATGCC GAGCGCGCCA AATTAGCGGC GGAAGTGGAG
CAGCTGCGCA ATCTGGTCGC CGAGCGGACG GCGGATCTGC AACGGGTCCA GGCGGAGTAC
GCGAATTACC GAAAGCGGGT GGAACGCGAC CGGGCGCTGG TCCGCGACCT CGCGGTGGCC
GACACACTTG CCCTGTTGCT TCCGGTCCTT GACGACATCG GCCGGGCCCG AGCGCACGGC
GAACTCGAGG GCGGCTTCAA GCAAGTCGCC GAATCATTCG AGGCGATTGT CACCAAGCTT
GGGCTGGTGG CATTCGGCGA TGTCGGCGAA CCGTTCGACC CGACACGACA CGAGGCCCTC
ATGCATGCGT ACTCCGACGA GGTCACCCAA CCGACCGTCG TTGAGGTATT CGCGCCCGGT
TACACGTACG CCGGGCGGAT CATCCGGCCG GCCAGAGTCT CCGTGGCGGA ACCAACCGTG
GCGCTGCCGG ACGATACGCC GCCCGACGGC ACGGCCGCGG AAGCCGGAGC AGCCGGCGCC
GGCACTGCAG GCGGCGCCGA CGGCCGTACG ACGTCGTCGG AGCCGAATGC TTCCGGTCCG
GACACGCCGC ACGCCAACGC ATAA
 
Protein sequence
MSEREEPVIR DKRRVRFDPL LGAVPGGTAP GEAAHAASAP AAHSADAAST HPTGGSAPAA 
DAGLPSPDDA ERAKLAAEVE QLRNLVAERT ADLQRVQAEY ANYRKRVERD RALVRDLAVA
DTLALLLPVL DDIGRARAHG ELEGGFKQVA ESFEAIVTKL GLVAFGDVGE PFDPTRHEAL
MHAYSDEVTQ PTVVEVFAPG YTYAGRIIRP ARVSVAEPTV ALPDDTPPDG TAAEAGAAGA
GTAGGADGRT TSSEPNASGP DTPHANA