Gene Acel_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2020 
Symbol 
ID4486427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2294649 
End bp2296025 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content65% 
IMG OID639730816 
ProductNAD(P) transhydrogenase, beta subunit 
Protein accessionYP_873778 
Protein GI117929227 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG GGGTTCTCTT CGCCTATTTC GTGACGGCGC TCTGTTTCAT CCTGGCGCTC 
AAGGGTTTGT CGTCGCCCAA ATACGCACGG TACGGCAACC TTATTGGTGC GTTCGGGGCG
GCGCTCGCCG TCGTCGTCAC GTTGACCCTG CACGGTCTCG GCCACCGGCT GCCCATCATC
ATCGCGATTG TCGTGGGCAC GCTCATTGCC GTGCCGGCGG CGCGGTTGGT GAAAATGACG
GAAATTCCGC AGATGGTCGC GATGTTCAAC GGCGTCGGCG GCGCCGCCGC GGCTTTGGTC
TCTCTCAACG AGTACGTCAA GCAGCACGCG GTTGATTCCG GCGGTGTCGC GGCGGCGGTC
GTCTTCAGCG GGATCGTCGG GAGCGTGAGT TTCACCGGTT CCCTGGTGAC TTTTGCGAAA
TTGCAAGGCA TCATGACGGG CCGGCCGATC GTGCTCCCTG CCGCGCGGGT CGTCACGCCC
GTGGTCGCCC TTGCCTCGCT CGGGCTGGGT ATCGCCGGCA TCGCGTTGAC CAGCGTGCCG
CTGGTCGTCG TGTGCGCCGT TCTGGCCCTG CTCCTCGGCG TCCTGTTCGT TCTTCCCGTG
GGCGGAGCCG ACGTGCCGGT GGTCATTTCC TTGCTCAACG CCTTCACCGG GTTGACCGTC
GCAGCCTCCG GTTACGTGCT GCAGAACACC CTGCTCATCG TGGCCGGAAC CTTGGTGGGC
GCATCCGGAA CGCTGTTGAC GCAACTGATG GCTCAGGCGA TGGGGCGCCC GTTGACGGGG
ATTCTCTTCG GTGCGTTCGC CGGTCCGACG ACCGCCGGTT CCACCGCCGA GCTGGCCGGC
GATCGCGCAG TCCGGTCGGC AGGGGCGGAG GACATTGCGA TTCTGCTGGG TTATGCGCGG
AAAGTTGCGA TCGTCCCAGG GTACGGATTG GCCGTCGCGC AGGCGCAGCA TACCGCCCGG
GAACTGGCCG ACGTCCTGGA AGCGCGCGGG GTGCAAGTGT TCTACGCGAT CCATCCGGTG
GCGGGCCGGA TGCCGGGGCA CATGAACGTG CTGCTTGCCG AGGCGAATGT TCCGTATGAG
CAGCTGAAGG AAATGGACGC CGCCAACTCC GAATTCAGCT CGACCGATGT CGCGGTGGTT
GTCGGCGCAA ACGACGTCGT CAATCCAGCA GCGCGCGACC TGCCGGGCAG CCCGCTCTAC
GGGATGCCGA TTCTCAACGT GGACGAAGCA GCGAACGTCG TCTTCCTCAA ACGGTCGCTC
CGCCCGGGAT TCGCGGGCAT CGACAATGCG CTGCTCTACC ACCCAAAGAC CACGGTCTTC
TTCGGGGACG CCAAGGAGTC CCTGGCGAAA ATCGTTGCCG CGGTCAAGAA CCTCTGA
 
Protein sequence
MSNGVLFAYF VTALCFILAL KGLSSPKYAR YGNLIGAFGA ALAVVVTLTL HGLGHRLPII 
IAIVVGTLIA VPAARLVKMT EIPQMVAMFN GVGGAAAALV SLNEYVKQHA VDSGGVAAAV
VFSGIVGSVS FTGSLVTFAK LQGIMTGRPI VLPAARVVTP VVALASLGLG IAGIALTSVP
LVVVCAVLAL LLGVLFVLPV GGADVPVVIS LLNAFTGLTV AASGYVLQNT LLIVAGTLVG
ASGTLLTQLM AQAMGRPLTG ILFGAFAGPT TAGSTAELAG DRAVRSAGAE DIAILLGYAR
KVAIVPGYGL AVAQAQHTAR ELADVLEARG VQVFYAIHPV AGRMPGHMNV LLAEANVPYE
QLKEMDAANS EFSSTDVAVV VGANDVVNPA ARDLPGSPLY GMPILNVDEA ANVVFLKRSL
RPGFAGIDNA LLYHPKTTVF FGDAKESLAK IVAAVKNL