Gene Acel_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2017 
Symbol 
ID4486423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2292937 
End bp2293134 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content62% 
IMG OID639730812 
Productcold-shock DNA-binding protein family protein 
Protein accessionYP_873775 
Protein GI117929224 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.679038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGGTG TAGTCAAGTG GTTCAACGCC GAGAAGGGTT TCGGCTTCAT CGCGGTCGAC 
GGCGGCTCGG ACGTCTTCGT CCACTACTCG GCCATTCAGG GCGAGGGTTA CCGGACCTTG
GCGGAGAACC AGCGGGTCGA CTTCGAGATC ACGCAAGGGC AGAAGGGGCC GCAGGCCGCC
AACGTTCGCC CGATCTAA
 
Protein sequence
MQGVVKWFNA EKGFGFIAVD GGSDVFVHYS AIQGEGYRTL AENQRVDFEI TQGQKGPQAA 
NVRPI