Gene Acel_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2016 
Symbol 
ID4486420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2290440 
End bp2292353 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content68% 
IMG OID639730810 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_873774 
Protein GI117929223 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.780836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG CCCTGTACCG CAAGTACCGG CCCGCGACCT TCGCCGAAGT GATCGGCCAG 
GAGCACGTGA CCGAGCCGCT TCGGCAGGCG TTGCGTCACA ACCGGGTCCA CCATGCGTAC
CTGTTCTCCG GCCCCCGTGG CTGCGGCAAG ACGTCGTCCG CCCGCATCCT CGCCCGGAGC
CTCAACTGCG AGCAGGGCCC GACACCGGAC CCATGCGGGG TCTGCCAATC ATGCCGGGAT
TTGGCGCCGA GTGGTCCGGG GAACGTCGAC GTCATCGAGA TCGATGCGGC GTCGCACGGC
GGCGTCGACG ATGCGCGTGA CCTGCGCGAG CGGTCGTTTT ACGCCCCGGC TGTCTCGCGA
TTCAAGGTGT ACATCATCGA CGAAGCGCAC ATGGTGACCG CCGCAGGTTT CAATGCGCTC
CTCAAACTCG TCGAAGAACC GCCCCCGCAT CTCAAATTCG TTTTCGCCAC CACGGAACCG
GACAAGGTTC TGCCCACCAT CAAATCGCGC ACCCACCACT ATCCATTCCG CCTGGTGCCG
CCGGCGGTTC TCCGCCAGCA CCTGGCTCAC ATTTGCGAAC AAGAAAAAGT CGCGATCGAA
CCCGGGGCGT TGAATCTCGT CGTCCGGGCT GGAGCGGGAT CCGTACGGGA CGCCCTGTCG
ATCCTCGACC AGCTGATTGC CGGGGCCGGG AGCGAGGGCG TGACCCATCG GTACGCCGCG
GCACTCCTCG GTTACACCGA CGCCGCCCTG CTCGATGAAG CCATCGAGGG GCTGGCCCGC
GGCGACGGCC CGGCGGTTTT CTCGGTGGTG ACGTCGGTCA TCGACGCGGG TCACGACCCC
CGGCGTTTTG CGGAAGATAT CCTGCAGCGG CTGCGCGACC TGATCGTTGT GGACGCCGTG
CCGGATGCGC CGGCGCGCGG TTTGCTCGAC GTCCCAGAGG ATGCGATGGA CCGGATGCGC
CGGCAGGCCG CTGCATTTGG TCGCACCGCG TTGTTGCGTG CCGCGGAGAT TGTCAGCGCC
GGCCTGGCGG AAATGCGCGG TTCGGTCGCT CCGCGACTGG TGCTGGAATT GATCGTCGCG
CGGCTTCTCG TTCCGGCGGC GGATCGGGGA GAGACCGGTG TGCTCGCCCG GTTGGAGCGG
ATCGAGCGGC GGCTCGGGTT ATCGGCCGGC GGGTCCGTGG CCGGTGAATT ACCCGATCAG
GGACAGGCGA CCGGTCCTTC GACACGACCG AGCCGGGCGG TTGATGAACC GGTGCGACAT
GGCCCGGCGG TTGGTGAACC GGGCCGTGAA AGCGCCCAGC CCAGGACGGG TTCCCGGCCG
TCGGCCCGTG AGGCCGTCGA ATCCTCGGCC GGTCCGCCGG GCCGTGAGGC CGTGGACTCC
TCGGCCAGTC CACGGGTGCC GCGGCGAGAC GCACCGGCCG ACCAGGCGGC TGTCCTGCGG
GCGTGGGACG ACGTCCTTGA AGCCACGAAG CAGCGCCGCC GCGTCGCGCA CTCTCTCCTG
ATCTCCGGTC CAGCCCAGGT GGTCGACGTG CGTGGGTCGA CCATTGTCGT CGGCTTCACC
ACCCCGGCGC TCGAACGGCA ATTTGCGCTG GGACCGCGCA ACGAAGAAGC GCTCGCGGGG
GCGCTGACGG ACGTCCTCGG CGGGCAGTGG CGGATCGAGA CGACGGTCCT TGGTTCCACC
GGATCCGGCC CCGAGGTGAC CGGAACCGCC GCGGTCGGCG CGGAACGACC CCACTCGTCC
ACCTCGGGAA ATCGCGGAGC AGCTGAGCCG CGCGATCCTG AGCCGGACGA TCTGCCGGGA
GACGGGGTCG ATCCGGATGA TCCACCCGTT GAGACGTCCG AGAGCGAGAC GGAGCACCTC
GCGCTGCTCC AACGGCACCT GGGAGCGACT GTGATCGAGG AGGACGTCGA CTGA
 
Protein sequence
MTLALYRKYR PATFAEVIGQ EHVTEPLRQA LRHNRVHHAY LFSGPRGCGK TSSARILARS 
LNCEQGPTPD PCGVCQSCRD LAPSGPGNVD VIEIDAASHG GVDDARDLRE RSFYAPAVSR
FKVYIIDEAH MVTAAGFNAL LKLVEEPPPH LKFVFATTEP DKVLPTIKSR THHYPFRLVP
PAVLRQHLAH ICEQEKVAIE PGALNLVVRA GAGSVRDALS ILDQLIAGAG SEGVTHRYAA
ALLGYTDAAL LDEAIEGLAR GDGPAVFSVV TSVIDAGHDP RRFAEDILQR LRDLIVVDAV
PDAPARGLLD VPEDAMDRMR RQAAAFGRTA LLRAAEIVSA GLAEMRGSVA PRLVLELIVA
RLLVPAADRG ETGVLARLER IERRLGLSAG GSVAGELPDQ GQATGPSTRP SRAVDEPVRH
GPAVGEPGRE SAQPRTGSRP SAREAVESSA GPPGREAVDS SASPRVPRRD APADQAAVLR
AWDDVLEATK QRRRVAHSLL ISGPAQVVDV RGSTIVVGFT TPALERQFAL GPRNEEALAG
ALTDVLGGQW RIETTVLGST GSGPEVTGTA AVGAERPHSS TSGNRGAAEP RDPEPDDLPG
DGVDPDDPPV ETSESETEHL ALLQRHLGAT VIEEDVD