Gene Acel_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2004 
Symbol 
ID4484941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2277485 
End bp2279947 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content65% 
IMG OID639730797 
Productglycosyl transferase family protein 
Protein accessionYP_873762 
Protein GI117929211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACTG GGACGTCGAC CGAAGGCCGG CTTGGGCCCG GCCGGATCTT CGGGCACCTC 
CTGACCCTCG GCTTCCTTGC ACTACTCACC GGGGCGCTGG TAGCCGCCCT GGCCCTTCCG
GTCGTCGGCG GCGCGGGCCT CGCCGTCCGC GACATGATCG GCAACATCAG CTTCACCGAC
CTGCCGCCCG AGCTCCAGAC TCCGCCGTTG GCGCAACGCT CAGTGATCCT CGCCGCTGAC
GGTACGGAAC TGGCCACCTT CTACTACGAA AACCGGCAGT CAGTTTCGCT GTCGGACGTC
GCCCCGGATA TGCGGGAAGC AATCGTCGCC ATCGAAGACG CCCGCTTCTA CGAACACCAC
GGCATTGATC CCATCGGCAT TCTGCGCGCG TTGATCCGTG ACACGTCGAG CGGATCCGCG
GTACAGGGGG CATCGACGAT CACGCAGCAG TACGTCCGCC AGGCGCTGGT GGAAATCAAC
ACGCAGAACG AGAATCAAGC AGGCGCCAAG GCCGCGACGG CCAAAACGTT GAGCCGAAAG
CTCACCGAAG CGCGCTACGC ACTCGCCCTG GAACAGAAGC TGTCAAAGGA CCAAATTCTT
GAGGATTACC TGAATACCGT GTATTTCGGC AGCGGCGCAT ACGGGATCGC CGCCGCCGCT
CAGCACTACT TCAGCGAGGA TCCATCCCAG CTCACCCTGC CGCAGGCCGC CCTCCTTGCG
GGCGTCGTCA ATAACCCGAG CCGCTTCGAC CCCATCCTCA ATCCACAGGA CGCGCTTGCC
CGGCGGAATG TCGTCCTCCA GCGGATGGCT GATCTGCACT ACATTACGCA GGCGCAGGCG
GACGCCGCGA TGCAGGCTCC GATCGGCTTG AAAGTCTCAA AAATCCCCAA CGGCTGCGCC
ACGTCCGTCG CGCCGTTCTT CTGCCAATAC GTCGTCGACG AAATTCTGAA CAATCCCGCC
TTCGGGCCGA CCCGGGCCGC GCGGACCAAC TTACTCCTCC GCGGCGGGCT CACGATATCG
ACAACGCTCG ACATGCACAT GCAGGCCGCT GCACAGAACG CCGTCAATAC CGTCATACCT
CCGGACCCAA CGAAAAACGC GGGACTCGCG GCCGCGATCG ATATCGTCGA CCCGAAGACC
GGTGCAATCC GGGCAATGGC CGTGGACCGT GCATTCGGCA GCGGCGAAGG CGAGACCGAA
GTGAACCTCG CCGCGGACTT GGCCCACGGC GGCTCGAGCG GCCGACACGC CGGCTCCACT
TTCAAAATCT TCGTGCTCGC CAGTGCTTTG CAGCAAGGCA TTCCGACCGG GCTCACTCTG
GTGTCACCGA ACCGCATCAC CATCAAGAAA GGTGCGATGA CGGACTGCAA CGGCGCTCCG
ACAAGTGAAT GGAACGTCGC CAATGCGGGC GACAGCGAAG CCGGTACGTT CGACATGGTG
CAGGCCACGA AACTCTCCGT GAACACCTAT TTCGCCCAGC TGGAGGAGAA GACCGGGCTC
TGCAAGCCGA TCCAAATCGC GGAAGCGATG GGAGTACGGC AAGCCACCGG GGCGCCGCTC
GACCAGGTGC CCTCGTTCGT GCTCGGTGCC GAGGACGTCG ACCCGCTCAC GATCGCCGGT
GCGTTTGCGA CTCTTGCCAA TCAAGGCACC TACTGTCCGC CGTTCGCCAT CACCGCGGTC
ACCCGCCAAC TCGGCGATAC AACCACCTCG ATTCAGGTGC CCGCGTCCAC CTGCCGACGG
GCAATCGACC CGGCCATCGC GAACGGCGTG ACGTCCTTGC TCACCCACGT CCTCGAGCCC
GGCGGCACCG GCGCGGGCCT GGGCATCGGC CGGCCGGCGG CGGGCAAGAC CGGAACTGAC
GATGAATACC GCAACGCGTG GTTCAGCGGC TACACCCCGA ATCTGGCTGC CTCGGTGTGG
GTGGGGAATC CCGACTCGAC GACGCCGATG CGCGCAATCA CCGTGAACGG TCACTACTAC
CGGGAGGTGT TCGGGGCGAC CTTGGCCGGT CCCATCTGGC AGAAAGCCAT GCAGGAGGCG
GTGAAGAACC TACCGGTGCA AGCGTTTCCC CAAGCGCCGG ACAGCGTGCT GAAGGGTCAG
CCCATCACCG TGCCGGACGT CGCCGGTCAG GATCCGCAGA CGGCGGTGAC CACCTTGCAA
CAGCTGGGTC TGGTCGTCAC GGTCGATCCG ACCCCGGTGT ACTCCGACCA ACCGGCCAAT
ACCGTGGCCG GCACCGACCC GCCGGCCGGC TCGACCGTGT ACGTGGGCAA CACCATCACC
GTGCACCTGA GCAACGGAGC AGGGCCTTCT CCGTCGGCCA GCCTTAGCCC GTCGGCGTCC
CCATCGGCCA CGGAATCGCC GTCCGCCAGC CCGTCGCCGT CGGCTTCGTC CAGCCCGCCG
CTCATCGTCC CGCTCCCGCC GCCTCACCAC CCGGGGCGTG GCGCACCGAC CCCCTCCGGC
TGA
 
Protein sequence
MATGTSTEGR LGPGRIFGHL LTLGFLALLT GALVAALALP VVGGAGLAVR DMIGNISFTD 
LPPELQTPPL AQRSVILAAD GTELATFYYE NRQSVSLSDV APDMREAIVA IEDARFYEHH
GIDPIGILRA LIRDTSSGSA VQGASTITQQ YVRQALVEIN TQNENQAGAK AATAKTLSRK
LTEARYALAL EQKLSKDQIL EDYLNTVYFG SGAYGIAAAA QHYFSEDPSQ LTLPQAALLA
GVVNNPSRFD PILNPQDALA RRNVVLQRMA DLHYITQAQA DAAMQAPIGL KVSKIPNGCA
TSVAPFFCQY VVDEILNNPA FGPTRAARTN LLLRGGLTIS TTLDMHMQAA AQNAVNTVIP
PDPTKNAGLA AAIDIVDPKT GAIRAMAVDR AFGSGEGETE VNLAADLAHG GSSGRHAGST
FKIFVLASAL QQGIPTGLTL VSPNRITIKK GAMTDCNGAP TSEWNVANAG DSEAGTFDMV
QATKLSVNTY FAQLEEKTGL CKPIQIAEAM GVRQATGAPL DQVPSFVLGA EDVDPLTIAG
AFATLANQGT YCPPFAITAV TRQLGDTTTS IQVPASTCRR AIDPAIANGV TSLLTHVLEP
GGTGAGLGIG RPAAGKTGTD DEYRNAWFSG YTPNLAASVW VGNPDSTTPM RAITVNGHYY
REVFGATLAG PIWQKAMQEA VKNLPVQAFP QAPDSVLKGQ PITVPDVAGQ DPQTAVTTLQ
QLGLVVTVDP TPVYSDQPAN TVAGTDPPAG STVYVGNTIT VHLSNGAGPS PSASLSPSAS
PSATESPSAS PSPSASSSPP LIVPLPPPHH PGRGAPTPSG