Gene Acel_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1993 
Symbol 
ID4486572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2269376 
End bp2270167 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID639730786 
Productendonuclease III / DNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_873751 
Protein GI117929200 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCCA CCAGCGTCAA TCGGACCGCG GCGACGCGTG CCGCGGCGAG CCGCGGGACC 
GCCGTCCGTG GCAAAGGGCA ATCCTCCGCT CCGCCGGACC GGGCCCGGGT CCGCCAGGCC
CGGGCGATCG CGAAGGCGCT TGCCGAGCTG TACCCCGATG CGCACTGCGA GCTGAATTTC
TCCAACCCGC TGGAACTTCT GGTGGCCACG ATCCTGTCTG CGCAGTGCAC GGACCAGCGG
GTCAACATGG TGACCCCCGC ATTGTTCGCC AAATACCGCA GTGCTGCGGA TTACGCGGCC
GCCGATCGCG CCGAATTGGA GAAGCTCATC GCCTCCACCG GCTTCTATCG CAACAAGACA
GCCGCCATCA TCGGCATGGC ACAGGCACTC TGCGAGCGGT TCGGCGGTGA GGTTCCGGAC
CGCCTGGACG ACCTCGTCAC TCTGCCGGGT GTCGGGCGCA AGACGGCGAA TGTTGTTCTC
GGCACGGCGT TCGGCATCCC GGGGATCACC GTCGATACGC ACGTGCTGCG ACTGGCCAAG
CGGTTCGGCT GGACGACGTC GAATGATCCG GTTGTCGTTG AGCAGGAGAT TGCGGCGCTT
ATTCCCCGCG AGGAGTGGAC CGCGCTCTCC CACCGGATGA TCTGGCATGG ACGCCGGGTG
TGTCATGCCC GGAAACCGGC GTGCGGCGCG TGCGGCCTTG CGCGGTTGTG CCCGTCGTAC
GGGATCGGCC CTACCGACCC CGTCGAGGCG GCAAAACTCG TCAAGACCGG CCCGGTTGAC
GCCCTGCGGT GA
 
Protein sequence
MVSTSVNRTA ATRAAASRGT AVRGKGQSSA PPDRARVRQA RAIAKALAEL YPDAHCELNF 
SNPLELLVAT ILSAQCTDQR VNMVTPALFA KYRSAADYAA ADRAELEKLI ASTGFYRNKT
AAIIGMAQAL CERFGGEVPD RLDDLVTLPG VGRKTANVVL GTAFGIPGIT VDTHVLRLAK
RFGWTTSNDP VVVEQEIAAL IPREEWTALS HRMIWHGRRV CHARKPACGA CGLARLCPSY
GIGPTDPVEA AKLVKTGPVD ALR