Gene Acel_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1988 
Symbol 
ID4486567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2265320 
End bp2266507 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID639730781 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_873746 
Protein GI117929195 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCG ATTGGCTCGA CCTCCTCCTG CTCGTCCTCA TCGCCGGCGC GGCCTTCGAT 
GGGTACCGAG CCGGGTTCGT CGTCGGCGTG CTGTCCTTCG TCGGCTTGGT CGGCGGCGGC
GTCGCCGGCG CATTCCTCGC CCCGGTTCTC GCCCGTCATT TCTCCGGAAA TGCGCGCGCC
ATTGCCGGCG TCATCACGGT TTTTGTCCTG GCATCCATTG GTCGAGCTCT CGCCGGTGCG
CTGGGGGCAT TTTTGCGGGA CCGCGTCCGC GGGCAATCCG GACGGGTCGT CGACGCGATA
GCCGGGGCAA TCGTCTCCGT CATCGCGGTT CTGCTCGTCG CATGGTTCAT CGGAAGTTCG
CTCGTACGAT CACCGTTCCC TGCCGTCGCC CGCGCGGTGA ACAATTCCCG GATCCTCGCC
GCGGTTGACC GAGAAATGCC GCCGGCCGTG GCAGCGTGGT TCGCCAACTT TCGCCGCGTT
GTCGTGGACG GCGCGTTGCC CCGGGTCTTC AGCGCACTCG GGGCTGAGCG AATCATTCCG
GTCGCGCCTC CGGATCCGGC AATTCTGAGC GACCCGGATG TGCGCCGCGC AGAAGCGAGC
GTGGTGAAAA TCACCGGAAT CGCCCGCGCC TGTTCCCGGG ATGTCGAGGG AAGCGGCTTC
GTCTTCGCAC CCGGCCGGGT GATGACCAAT GCGCACGTCG TCGCCGGCGT GACCCACCCC
GTCGTGCACC TCGCCACGTC CGACGCCCGT TACGCCGCAG TCGTGGTGTA TTACGACCCA
CGTGTCGACG TCGCCGTGTT GCGGGTCGAC GGTCTCACCG CGCCGCCACT GCAATTCGAC
CAGACACAGG CGGAGACCGG GGATTCCGCG GCCATCGCCG GTTTCCCGGA GAACGGGCCG
TACACCGTCG TTCCGGCCCG AATCCGCGGC GCTGAATTCG CCCGCGGGCC GGACATCTAC
CAGTCGACAC AAGTGACCCG CGAAGTTTAC GCAATCCGCG GTGACGTGGA GCCGGGCAAT
TCCGGCGGCC CGCTTCTCGA CCCGGCGGGC CGCGTGGACG GCGTCATCTT TGGGAAAGCG
GTCAACGATC CGCAGACGGG TTACGCGCTC ACGGCCGCGC AAGTCGCCGC TGCGGCGCGC
GCCGGCGTCA CGGCGACGCA GCCGGTCTCC ACCCAGGGAT GCGATTAG
 
Protein sequence
MHGDWLDLLL LVLIAGAAFD GYRAGFVVGV LSFVGLVGGG VAGAFLAPVL ARHFSGNARA 
IAGVITVFVL ASIGRALAGA LGAFLRDRVR GQSGRVVDAI AGAIVSVIAV LLVAWFIGSS
LVRSPFPAVA RAVNNSRILA AVDREMPPAV AAWFANFRRV VVDGALPRVF SALGAERIIP
VAPPDPAILS DPDVRRAEAS VVKITGIARA CSRDVEGSGF VFAPGRVMTN AHVVAGVTHP
VVHLATSDAR YAAVVVYYDP RVDVAVLRVD GLTAPPLQFD QTQAETGDSA AIAGFPENGP
YTVVPARIRG AEFARGPDIY QSTQVTREVY AIRGDVEPGN SGGPLLDPAG RVDGVIFGKA
VNDPQTGYAL TAAQVAAAAR AGVTATQPVS TQGCD