Gene Acel_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1982 
Symbol 
ID4486561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2256475 
End bp2257656 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID639730775 
Producttype II secretion system protein E 
Protein accessionYP_873740 
Protein GI117929189 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAT CGACCCCGAC AGCGACCGAG GCGTTGACCC GATCCGTTCG GCTGCGCCTC 
GCCGCCGCGC ACGCCCCGAT CTCCCGCGCT CAGGTCGCCC ATGCCCTGGT CTCTGAAGGC
GCCGCCCCAA CACTTGGCGT CCGGGGTGTT CTTGCGGCTG CTGAGGCGGT GTTCGCCGAT
ATCTCCGGAG CCGGCGTCCT TGAACCGCTG TTCGCCTCGT CTGGTGTGAC GGACGTGTTG
GTCAATGGAC CAGATGAGGT GTGGGTTGAC CGTGGAACAG GTCTGCAGCG TGTCGACGTC
GACCTCGGTT GCGACGCCGA CGTACGGCGA CTAGCCGTCC GGCTGGCAGC CGCCGCTGGA
CGTCGGCTCG ATGAGGCGGC GCCGTGTGTC GACGTCCGGC TACCGAACGG GGTTCGCATG
CACGCCGTTC TCCCACCGAT TTCCACCAGC ACGCACCTAT CGTTTCGGGT TCCTAGTCGT
CGCCCGTTTC GGTTCACGGA ATTCGTCGAG AGCCGGACGA TTGATCCGCG CCTTGCGCCG
TATTTACAGG CGCTCGTGGC GAACCGGATT TCCTTCCTTG TCAGCGGCGC GACCGGCAGC
GGGAAAACGA CGCTGCTTGG CTGCCTCCTC GGTTTGGTTC ACCCGAGAGA GCGGGTCGTC
CTCGTTGAGG ACGTGCCCGA AATCCAAACA ATTCACCGTC ACGTTGTCCG CCTGCAGGCG
CGCCCCGCCA ATGCCGAAGG CGCCGGTGCC GTCAGCGTGC GGCAATTGGT TCGCGAAGCC
CTCCGGATGC GGCCGGACCG CATCGTGATC GGTGAGGTAC GCGGTACTGA ATGCATCGAC
CTTCTCGCTG CGCTGAACGT CGGCCACGAC GGCTGTGCGG GTACGCTGCA CGCTAATTCG
CCGGAGGATG TTCCGGCCCG CCTGGAGGCT CTGGCGATGG TTGGCGGGAT GCGTCGGGCT
GCAGTGCACA GCCACATTGC CGCCGGACTA CGCGCCGTGA TTCACATCGT CCGGGATGCG
GCTGGCGTGC GTACGGTGTC GGCGATTGGA ATTGTGCAGC GTCGCCGTGA CGGTCTGGTG
ACGGTCGTGC CTGCGGTGGG GGTGGCTGGT ACGCAGTTCT GGCGCGGCCG AGGCGTTGGG
GTGTTGGAGA ACTGGTTGGG CGCGCACGTG GCGGTGTCAT GA
 
Protein sequence
MTTSTPTATE ALTRSVRLRL AAAHAPISRA QVAHALVSEG AAPTLGVRGV LAAAEAVFAD 
ISGAGVLEPL FASSGVTDVL VNGPDEVWVD RGTGLQRVDV DLGCDADVRR LAVRLAAAAG
RRLDEAAPCV DVRLPNGVRM HAVLPPISTS THLSFRVPSR RPFRFTEFVE SRTIDPRLAP
YLQALVANRI SFLVSGATGS GKTTLLGCLL GLVHPRERVV LVEDVPEIQT IHRHVVRLQA
RPANAEGAGA VSVRQLVREA LRMRPDRIVI GEVRGTECID LLAALNVGHD GCAGTLHANS
PEDVPARLEA LAMVGGMRRA AVHSHIAAGL RAVIHIVRDA AGVRTVSAIG IVQRRRDGLV
TVVPAVGVAG TQFWRGRGVG VLENWLGAHV AVS