| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1981 |
|---|
| Symbol | |
|---|
| ID | 4485109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 2255660 |
|---|
| End bp | 2256478 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639730774 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_873739 |
|---|
| Protein GI | 117929188 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGT GGGTCATCGG GGGCTTGGTT GGCGCGGCCG TCCTCAGTGC AACGACTGGT
TCACGTCGCG CGCCGCGAAC GGCGCGCGGT CAGCCCCGCC GTTATGCGTT GCCGATGGCG
GCGGCGCTGT TTCTCGTGTG GCTCATCCTC GTCGTGGGCG TCATTCCCGC AGCAGTGATC
GGCGCGTTCG CTGGTGGAAC CGTCGGCTGG GCGACACGGC GCGTGCAGCG TCAGCTCCGC
AGAACGGTCA AGGCGGAACT CGTCCGATTT GGGCATGTGT GGGCTGCGCA GTTGCGATCC
GGGCGGGTAC CGGCAGATGC GTTGGCTGCG GCCGCCGGCG AGATGCACCA CCCTGCGCTG
GCTCGGCTGT TCGTTGCTAT TGCGGACGCC GCGCGCCACG GGGATATCGA CCGCGTCACC
GAACTTTTTG TGACACCCAC GGCAAAAATC GGCGGCCCGC CGCTTGCCGA TCTGGCGCGT
TACGCACCGT GCTGGCGGAT CGGTGTCGAG AGCGGAGCGG GTCTTGCTCG GCTGGTCGAG
CGGACAGCGA ATGCGATCCA AGCCGATGTG GACCTCCACC AGGAGGTGCA GACCGCGCTC
GCTGCGCCCC GTGCCACCAT CCGGCTCCTC GGTGCGCTGC CGATCGCCGG TCTTCTCTTC
GGCACGGTCA TTGGCGTCGC GTCTTGGCAA TTTTTGTTCC GGCACCCGCT TGGTCTGGCC
TGCCTGAGCG CAGCTGTGGC TCTGGAAGTC GGCGGCCTGC TGTGGTGTCG GCGCATCGCG
GCCCGCATCT ATTCTGCGGC GACTCTCCAG CACCACTGA
|
|---|
| Protein sequence | MNPWVIGGLV GAAVLSATTG SRRAPRTARG QPRRYALPMA AALFLVWLIL VVGVIPAAVI
GAFAGGTVGW ATRRVQRQLR RTVKAELVRF GHVWAAQLRS GRVPADALAA AAGEMHHPAL
ARLFVAIADA ARHGDIDRVT ELFVTPTAKI GGPPLADLAR YAPCWRIGVE SGAGLARLVE
RTANAIQADV DLHQEVQTAL AAPRATIRLL GALPIAGLLF GTVIGVASWQ FLFRHPLGLA
CLSAAVALEV GGLLWCRRIA ARIYSAATLQ HH
|
|---|
| |