| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1980 |
|---|
| Symbol | |
|---|
| ID | 4485108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 2255047 |
|---|
| End bp | 2255658 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639730773 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_873738 |
|---|
| Protein GI | 117929187 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACCG ATATCTTCTT GTGGCTGTTT CTCATCGGCC TCGGATGCGC GGCCGCCGGC
GGCGACGCAC GTAAACGCAT GCACCGACGG CTGGCTGCAC CGGGATTTCG GTGGAATGCC
GGCCGGCCAC GGCGACAGGT CCTGACGCGA GCACGACGAT CTCCTGCGGT TACCGGTGAT
CTTCTTCCTC TCGCGTGTGA CCTTCTTGCC GCTTGTCTCG AAACGGGTGT GACCAGTCGG
CGGGCGTTGG AGCTTGTTGT CGAGGCGTTG GGTCGTGACA GTCTCAACAC GCCCCTTCCC
GCGGTATCCA GCGCGCTTCG GCTCGGCGCG TCTGCGGTGC AAGCGTGGGC CGAGGTGCCG
GCCGAACTCG GCTGGACCGA GGTCGCGCGG GCATTTGGAC AAGCGGAGAA CTCGGGCCTT
GCCCTTGCCG GCACATTGAC GCGGCTGGCT GACGAACGGC GCCGGACGGT TCGAGCGTGG
GCGGCGCAGG CCACCGCCCG GGCGGGCGTA CGGATGGCGC TGCCCCTTGG TGTGTGTTTC
TTACCGGCAT TTCTTCTGGT CGGCGTTCTG CCGGTCATCT TTGGTTTTGC GCATTCACTC
TGGCCGCGGT AA
|
|---|
| Protein sequence | MRTDIFLWLF LIGLGCAAAG GDARKRMHRR LAAPGFRWNA GRPRRQVLTR ARRSPAVTGD
LLPLACDLLA ACLETGVTSR RALELVVEAL GRDSLNTPLP AVSSALRLGA SAVQAWAEVP
AELGWTEVAR AFGQAENSGL ALAGTLTRLA DERRRTVRAW AAQATARAGV RMALPLGVCF
LPAFLLVGVL PVIFGFAHSL WPR
|
|---|
| |