Gene Acel_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1974 
Symbol 
ID4485102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2249728 
End bp2250225 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID639730767 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_873732 
Protein GI117929181 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGGT CGACGGTGAC CTTGCGGTTT ACCGCGCTTC CCGCCCACGT GCGGACTGCC 
CGGTTTGTCG CGACAGCGGT CGCCCGTCGT GCCGGACTGC CGGAGTCGTT GCTCGACGAG
GTACGGCTCG CCGTCTCCGA GGCGTGCTCC CTTGCCGTCC GGGCGCATCA ACGACATGCG
CCGGCCGTGC CGGTCGAGGT ACGGCTGAGC GACGACGGGA AAACCTTCTG CGTCGAGGTG
CAGGACGCCG TTCCGCGCAC CGGGCGGGCT GTCGTCCAAC CGCCATCAGG ACGCCCGAAC
GCCAATGCGG CCGCCGCGCG GGCGGTGCTC GGTCTCGACG GCGCCGAGGG ACTCACTGAC
GTCGATGACC CGGCAACCCG CGAACAGCTC GGCCTCGCGG TCATCGCCGG CCTCGTTGAT
GATCTCCGGG TTGAGTACGG ACCGGCCGGT GCGGTGATCT CATTGCGGTG GCCTGCAGCC
GAAGGCGTCG CCGAGTGA
 
Protein sequence
MVRSTVTLRF TALPAHVRTA RFVATAVARR AGLPESLLDE VRLAVSEACS LAVRAHQRHA 
PAVPVEVRLS DDGKTFCVEV QDAVPRTGRA VVQPPSGRPN ANAAAARAVL GLDGAEGLTD
VDDPATREQL GLAVIAGLVD DLRVEYGPAG AVISLRWPAA EGVAE