Gene Acel_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1964 
Symbol 
ID4485092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2230713 
End bp2231546 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID639730757 
ProductPSP1 domain-containing protein 
Protein accessionYP_873722 
Protein GI117929171 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.71417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGG CCGTCAGCTT CAACCGATAC GGGAGGCTGT ATTACCTTGA CCCCGGGCCG 
TACGCCCCGA AGGTCGGCGA CAAGGTGCTG TACCCGACAA CGGCGGGCAA CGAGGTTGCC
GAGTGCGTCT GGCCCCCGAC GTACGTGTCC GAGGAGATCG AGGGTCTGCC GGTCTGCGCC
GGGTTTGCCA CGGACGCCGA TCTTGCCCGT GACGAGCGGA ACCGCGGGCG ACGGGCGCAC
GCCCGGGTGG TCGCCCGCCG GTTGATCCGC GAACACAGCC TGCCGATGAA GCTGGTCGGG
GTTGATTTTC TGGACGCCGA CAATACGTTC CTGTTCTATT TCAGCGCGCC GCACCGGGTG
GATTTCCGGG CGTTGGTCCG CGCTCTCTCG GCGGAATTGG ACGCACGTGT GGAGCTGCGG
CAATTGCGCG CCCGCGACGA GGCTCGTGTG CAGACGGCGA TCGGCCCATG CGGCCGGGAC
ACGTGTTGCT CGACTTTTCT CAAGGACTTT GAGCCGGTCT CGGTCCGCAT GGCACGCGAC
CAGGATTTGC CGGCGAATCC GCTGCGGATT TCCGGTGCCT GCGGACGGCT CATGTGCTGC
CTGAAATACG AGCATCCGTT GTACGCCGAA TTCAAGGCGG ATCTCCCGCG GATCGGGAGC
CGGGTCTCCA CACCGGACGG CGACGGGGTG CTCGTCGGCT ACAACGTCCC GGCCGGAAAC
GTGGTCGTGA AGCTCACCGC GACTGGAGAA CGGTGCGTGT GTCCGAAGGC GAGCGTGTGC
GGTTCGCGCC GCAGCTACGA GGAGCGGTAC GGCCGCCGCG AGCCGCAGGA GTGA
 
Protein sequence
MMMAVSFNRY GRLYYLDPGP YAPKVGDKVL YPTTAGNEVA ECVWPPTYVS EEIEGLPVCA 
GFATDADLAR DERNRGRRAH ARVVARRLIR EHSLPMKLVG VDFLDADNTF LFYFSAPHRV
DFRALVRALS AELDARVELR QLRARDEARV QTAIGPCGRD TCCSTFLKDF EPVSVRMARD
QDLPANPLRI SGACGRLMCC LKYEHPLYAE FKADLPRIGS RVSTPDGDGV LVGYNVPAGN
VVVKLTATGE RCVCPKASVC GSRRSYEERY GRREPQE