Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1963 |
Symbol | |
ID | 4484934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 2229427 |
End bp | 2230458 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639730755 |
Product | sodium/calcium exchanger membrane region |
Protein accession | YP_873721 |
Protein GI | 117929170 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0530] Ca2+/Na+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.520239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGTCG CATTGCTCGT CGGCACCGCA GTCGTCATCT ACGTCGCCTG TGAGTGGTTC GTCAACGCCA TCGAGTGGCT TGGGCTGCAC CTGCGCATCG GGCCGATTGC CGTGGGGACG ATTCTCGCCG CGGTGGGCAC CGCCTTGCCG GAGAGCGTCG TCACTTTTGT CGCCGTCGTC TTCGGGCACA GTGCAACGTT TGACGCCATC GGGATGGGTG CCGCACTCGG CGGACCCCTG GTACTCGCGA CGATTGCCTA CGCGGTGGTC GGCTTTGTGC TTTTGTTGCG CGGACGGCGC CAGGTCGTGA TGCGAAACAC GAGGCCTGCG TCCGGAAATC CGGCCTGGGA ATCCGATAGT GACGTCGAAG TCCCGACCAA ACAACTCGTC CGCGACCAGC GGTGGTTCCT CGCGGTGTTC GTGGTCAAGG TTGGGCTGGG GCTCGTGACA TTCGCCGTCA AACCGTGGTT GGGATTTGCA TTCTTCGCGG TCTACATCGT GTATTTCATA CGTGAAGTAT CAGCGGGCGG CGAACACGAC GAATCCACTC TGGAACCGTT GAAACTAACG CCGCGCACGG TGCGGCCGCA TGTCGGTGCC GTTGTCGCAC AGACCGTGGG AGCACTCGCC GCAATTTTCG TTGCCTCGCA ACTGTTCGTC GACCAGCTTG CCTGGGCCGG CAAAACCCTT GGGCTTTCCG CAAGCGTCGT CGCGCTGCTC CTTTCCCCGG TGGCCACCGA GCTTCCAGAA ACCATCAACG CCCTCATCTG GGTGCGGCAA GGAAAGACAC AACTCGCGCT CGCCAATATT TCCGGAGCGA TGATGATTCA GGCAACGGTT CCGAGCGGTT TCGGGTTGCT CTTCACGCCG TGGCGGTTCG ACGGGCCGCT TCTGCTGTCC GGCCTGGCGA CCATGGTGGC GATCGGCTAT CTGCTCGCGA CGATCGGCCG TCACCGGCTG AGCAGCGCCC GGCTGGCATA CGCGGCCGTT CCGTACGCCG GATTCGCCGC CGGGCTGATC TTCCTCCGGT GA
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Protein sequence | MHVALLVGTA VVIYVACEWF VNAIEWLGLH LRIGPIAVGT ILAAVGTALP ESVVTFVAVV FGHSATFDAI GMGAALGGPL VLATIAYAVV GFVLLLRGRR QVVMRNTRPA SGNPAWESDS DVEVPTKQLV RDQRWFLAVF VVKVGLGLVT FAVKPWLGFA FFAVYIVYFI REVSAGGEHD ESTLEPLKLT PRTVRPHVGA VVAQTVGALA AIFVASQLFV DQLAWAGKTL GLSASVVALL LSPVATELPE TINALIWVRQ GKTQLALANI SGAMMIQATV PSGFGLLFTP WRFDGPLLLS GLATMVAIGY LLATIGRHRL SSARLAYAAV PYAGFAAGLI FLR
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