Gene Acel_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1963 
Symbol 
ID4484934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2229427 
End bp2230458 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID639730755 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_873721 
Protein GI117929170 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.520239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGTCG CATTGCTCGT CGGCACCGCA GTCGTCATCT ACGTCGCCTG TGAGTGGTTC 
GTCAACGCCA TCGAGTGGCT TGGGCTGCAC CTGCGCATCG GGCCGATTGC CGTGGGGACG
ATTCTCGCCG CGGTGGGCAC CGCCTTGCCG GAGAGCGTCG TCACTTTTGT CGCCGTCGTC
TTCGGGCACA GTGCAACGTT TGACGCCATC GGGATGGGTG CCGCACTCGG CGGACCCCTG
GTACTCGCGA CGATTGCCTA CGCGGTGGTC GGCTTTGTGC TTTTGTTGCG CGGACGGCGC
CAGGTCGTGA TGCGAAACAC GAGGCCTGCG TCCGGAAATC CGGCCTGGGA ATCCGATAGT
GACGTCGAAG TCCCGACCAA ACAACTCGTC CGCGACCAGC GGTGGTTCCT CGCGGTGTTC
GTGGTCAAGG TTGGGCTGGG GCTCGTGACA TTCGCCGTCA AACCGTGGTT GGGATTTGCA
TTCTTCGCGG TCTACATCGT GTATTTCATA CGTGAAGTAT CAGCGGGCGG CGAACACGAC
GAATCCACTC TGGAACCGTT GAAACTAACG CCGCGCACGG TGCGGCCGCA TGTCGGTGCC
GTTGTCGCAC AGACCGTGGG AGCACTCGCC GCAATTTTCG TTGCCTCGCA ACTGTTCGTC
GACCAGCTTG CCTGGGCCGG CAAAACCCTT GGGCTTTCCG CAAGCGTCGT CGCGCTGCTC
CTTTCCCCGG TGGCCACCGA GCTTCCAGAA ACCATCAACG CCCTCATCTG GGTGCGGCAA
GGAAAGACAC AACTCGCGCT CGCCAATATT TCCGGAGCGA TGATGATTCA GGCAACGGTT
CCGAGCGGTT TCGGGTTGCT CTTCACGCCG TGGCGGTTCG ACGGGCCGCT TCTGCTGTCC
GGCCTGGCGA CCATGGTGGC GATCGGCTAT CTGCTCGCGA CGATCGGCCG TCACCGGCTG
AGCAGCGCCC GGCTGGCATA CGCGGCCGTT CCGTACGCCG GATTCGCCGC CGGGCTGATC
TTCCTCCGGT GA
 
Protein sequence
MHVALLVGTA VVIYVACEWF VNAIEWLGLH LRIGPIAVGT ILAAVGTALP ESVVTFVAVV 
FGHSATFDAI GMGAALGGPL VLATIAYAVV GFVLLLRGRR QVVMRNTRPA SGNPAWESDS
DVEVPTKQLV RDQRWFLAVF VVKVGLGLVT FAVKPWLGFA FFAVYIVYFI REVSAGGEHD
ESTLEPLKLT PRTVRPHVGA VVAQTVGALA AIFVASQLFV DQLAWAGKTL GLSASVVALL
LSPVATELPE TINALIWVRQ GKTQLALANI SGAMMIQATV PSGFGLLFTP WRFDGPLLLS
GLATMVAIGY LLATIGRHRL SSARLAYAAV PYAGFAAGLI FLR