Gene Acel_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1942 
Symbol 
ID4486361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2200678 
End bp2201541 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID639730733 
Productglycosyl transferase family protein 
Protein accessionYP_873700 
Protein GI117929149 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGC CCGCAGCAAC CATTGTCATG GCGGCGCACA ACGAAGCGGC GGTCATCGAG 
CGGACCTTGC GTGCTTTCCT GCCGCAGAGT GCGCCGGGCG AATTCCAGGT TCTCGTGGTG
TGCAATGGTT GCTCGGACGG CACCGCCGAG GCGGCGCGCT CAACCGGAGA GCAGACCGGC
AGGCCGGTCG AGGTTCGGGA AATTCCGGTG GCGTCCAAGA TAGCCGCCCT GCGGAAAGCG
GAGGACGAGC CGCTGGTTGA GCGTGCGGAT GTGCGCATTT ATCTGGACGC CGATGTGCTC
GTCGACGTGA CAACGCTCCG GAACGTGCGG GATGCTGTGG CGGGTGACAT GCCGCGGCTC
GGCGTCGTGT GCGGCGAGGT CGATGCAGCC GGCTCGTCCC GGCTGGTGCG CGCGTATTAC
GCCGTCTGGT CGGCACGGCA GCATGCCGCC CCTGATGGGT CGGGTGCGGG AATTTTCGCG
GTGAACCGCG CGGGAGCGGC GCGGATCTCG CAGTGGCCGG ATGTTCTCAG CGATGACGGT
TTTGTTGCGC GCCAATTTGC AGCGTCGGAA CGCGTCGTCG CGGCGGGCCG CTCGGTCATC
CGGGCGCCTC GGACGGTGTC CGCTCTGGTA CGCCGGCGTG CGCGGATTGT GAACGGGAAT
CGCGAACTCG ACATCCGCTG GCCGCGTACG GCCGCCGAAC CGCCCGCCGT CCGCCGGCTC
GTGCTGGCTC GCCGTGTCTC GCTCGTCCAA GCCGGTGTCT TCGTCACGCT GACGATTGCG
GCACGCGCGT TGGCCGCCTG GCGTCGATGG CGCGGCCGAG CTGCTATGTG GTCAGCGGAC
GACACGTCGC GGCGGGCATA CTGA
 
Protein sequence
MAEPAATIVM AAHNEAAVIE RTLRAFLPQS APGEFQVLVV CNGCSDGTAE AARSTGEQTG 
RPVEVREIPV ASKIAALRKA EDEPLVERAD VRIYLDADVL VDVTTLRNVR DAVAGDMPRL
GVVCGEVDAA GSSRLVRAYY AVWSARQHAA PDGSGAGIFA VNRAGAARIS QWPDVLSDDG
FVARQFAASE RVVAAGRSVI RAPRTVSALV RRRARIVNGN RELDIRWPRT AAEPPAVRRL
VLARRVSLVQ AGVFVTLTIA ARALAAWRRW RGRAAMWSAD DTSRRAY