Gene Acel_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1936 
Symbol 
ID4486355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2193545 
End bp2194537 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content64% 
IMG OID639730727 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_873694 
Protein GI117929143 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGCTG ATGTTGACGC GTTGCGCGGT TGTCGGGCCT TGGTGACGGG CGGTGCTGGA 
ACGATCGGCT CGACCATCGT GGACCAGCTC ATAGCGGCCG GTGCGTCGCG GGTCGTGGTG
CTGGACAATT TCGTCCGCGG TCGTCGGGAG AATCTCGTCG CCGCATGCGC GTCCGGCCGG
GTTGAGGTCA TCGAGGGCGA TATTCGGGAT CCGGCGGTGG TCCGCGACGC CGTCGCCGGG
ACGGACCTTG TCTTTCACCA AGCGGCGATT CGTATCACGC AGTGTGCGGA AGAACCACGG
CTTGCGTTCG ATGTGCTGGC GACGGGGACG TTCAATGTCG TCGAGGCCGC CGTTGCAGCC
GGGGTTGACA AGGTCGTCGC CGCGTCGTCG GCTTCGGTGT ACGGGCTGGC GGAGAGTTTC
CCAACGGAAG AAACGCACCA TCCGTACCAC AACCGAACGC TGTACGGCGC CATCAAGACC
TTCAACGAGG GGCTGCTACG CAGCTTCAAC GACATGTACG GGCTCAAGTA TGTCGCGCTG
CGGTATTTCA ACGTGTACGG CCCGCGCATG GACGCCTTCG GCGTCTATAC GGAAGTACTG
ATCCGTTGGG CGAAACGCAT CGCCGCCGGT GAGCCGCCCA TCATCGAAGG CGACGGATTG
CAGACCATGG ACTTCGTGCA CGTCGCGGAT GTGGCGCGGG CGAACCTTCT TGCTGCTGCG
GCTCCGGTGA GCGACGAAGT GATTAATGTC GCCTCCGGAA CGGAAACCAG TCTGCGCGAG
CTGGCCGATG CCCTTCTCGC AGCGATGGGC AGCGATCTGC GTCCGGAATT CGCCCCGGCA
CGGCGGGTCA ACAACGTCAC CCGGCGGTTG GCGAGCACGC GCAAGGCGAA GGAATTGCTC
GGCTTTGAGG CCCGCATCAG CCTCGCTGAC GGTTTGCACG ACTTGGTGCG GTGGCTCCAG
GCCGAGGGTG TCATTCCGGT GAGGGTCGCA TGA
 
Protein sequence
MIADVDALRG CRALVTGGAG TIGSTIVDQL IAAGASRVVV LDNFVRGRRE NLVAACASGR 
VEVIEGDIRD PAVVRDAVAG TDLVFHQAAI RITQCAEEPR LAFDVLATGT FNVVEAAVAA
GVDKVVAASS ASVYGLAESF PTEETHHPYH NRTLYGAIKT FNEGLLRSFN DMYGLKYVAL
RYFNVYGPRM DAFGVYTEVL IRWAKRIAAG EPPIIEGDGL QTMDFVHVAD VARANLLAAA
APVSDEVINV ASGTETSLRE LADALLAAMG SDLRPEFAPA RRVNNVTRRL ASTRKAKELL
GFEARISLAD GLHDLVRWLQ AEGVIPVRVA