| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1913 |
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| Symbol | |
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| ID | 4485560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 2160857 |
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| End bp | 2164435 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639730704 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_873671 |
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| Protein GI | 117929120 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCGG GTGTTTGTCT GACCGGATTC GGCATGGATC TACGTGGCTT GATCACGGCC
CTGCTGGGCG ATGACGGCTT CGCGCGTGTC CGCGACGCAG CCCGCAAGGG CATTGCGAAC
GTCGAGGTCG GCGTTCCGCG TCCACTCCGC GCGTTCATCA CGGCGCTGAT CGCGGCTGAC
GCACCGTACG GCGCTGGACG TCCCGTGCTT GCGGTCACGG CGACCGAGCG GGAAGCCACC
GAGCTTGCCA CCGCGCTGGA ACCCCTGCTC CCCGCCGGCG CGGTCGCCGA ATATCCCGCG
TGGGAGACCC TGCCGCACGA GCGGTTGTCG CCGCGTGCGG ACACCGTCGG ACGCCGGGTC
GCCGTCCGGC GCCTCCTTCG GGAGCAGGGG GGCACGCTTC GGGTCATTAC TACGCCGGTG
CGCGCGCTGC TCCAGCCGCA GGTCGCCGGA TTGGGAGATC TCGAGCCGGT CGAGCTGCGG
CCCGGTGATG AGGCCGATCT CAATGATGTC GTGGCCCGGC TGGTGGCGAT CGGCTACCAC
CGCGTCGATC TCGTCGAACG ACGAGGGGAG ATCGCCGTCC GCGGCGGCAT CCTCGACATT
TTTCCGCCCA CCGCCGAGCA TCCGCTCCGG GTGGAATTCT TCGGTGACCG TATTGAAGAA
ATTCGCCCTT TCCGCGCCGG CGACCAGCGG AGTTTCGGTG AGTCGGCGGA TCGGGTGTGG
GCGACGGCAT GCCGGGAATT GCTCCTGACC GACCGTGTCG TCACCCGCGC GGCCGAGTTG
GCGCAGCGGT ATCCGCAGCT CGCTGACATT CTCGGCAAGG TCGCGCACGG TGTCGTCGTC
GAAGGGATGG AAGCACTCGC CCCGCTGCTC GCGGACGAGA TGAACCTCCT GCTTGACGAA
GTCCCGTCCC AGACGGTGGT CGTGGTCTGC GATCCCGAGC GGGTGCGCGC CCGGGCCGCG
GACGTCGTCC GGACCGGCGA GGAGTTTCTG CACGCCGCCT GGGCCGGCGC CGCGGCGGGT
GGGAACGCAC CGATCGACCT TGCCGCGGCG GCGTTACGGC CGTTCGCCGA TATTCGCCGC
CACGCCGCAG ATCTCGGCCT GGCCTGGTGG TCCATCTCGC CGCTGCAGAC CGCGGACGCC
GCGGAATTTC GGGACGACAC CGGTGAGGTC GTCATCGTCC CGGACGCGCA CGAAGCGCCG
GCCTACCGCG GGGACACGCA GGCACTCGTC GCCGATGTCA AGGGCTGGCT GGGTGACGGG
CTGAGGGTCG CCGTCCTCAC CGCCGGGCAC GGTTCCGCCC AGCGGATCGT CGAAGTGCTG
GCCGGTGAGG ACGTTCCGGC CCGATGGACG GAGACCATCC CGCAGCCGCC CGACCACGAC
CTCGTTTCGG TGAGCTGCGG AGGGCTGGAC GCCGGGTTCA TCGCGCGCGG TGCGGGGCTC
GTCGTCCTCA CCGAGACGGA GATTTTCGGC ACCCGTGCCG CGGCCCGCAA CCTCGGCAGG
CTGCCAAGCC GGCGACGGAA ATCCATCGAC CCGCTGGAAC TTCGGCCGGG CGATTTCGTC
GTCCACGAGC AGCATGGTGT CGGCAGGTTC GTCGGCATGG CGACCCGGGA AATCGGCGGT
GCGACCCGGG AGTACCTCGT CATCGAGTAC GCCCCGTCCC GGCGCGGTCA ACCGGGGGAC
CGGCTCTGGG TTCCGACTGA CTCCCTCGAC CAGGTCACTC GGTACGTCGG CGGAGAGGCA
CCGACGCTGG ACCGCATCGG CGGCGCGGAC TGGGCGCGGC GCAAAGGCCG GGCGCGCAAA
GCCGTCCGCG AAATCGCAGC CGAATTGATT CAGCTGTACA GCGCGCGGAT GGCGTCGCCC
GGCCATGCGT TCGGACCGGA CACGCCCTGG CAGCGGGAAC TCGAAGAGGC TTTTCCGTAC
GTGGAAACGC CGGATCAGCT GCGCACCATC GAGGAGGTCA AGGCCGACAT GGAGCGGCCG
GTCCCGATGG ATCGGCTGAT CTGCGGCGAC GTCGGATACG GCAAGACCGA AATCGCGGTG
CGCGCGGCGT TCAAGGCGGT TCAGGACGGC AAGCAGGTCG CCGTGCTCTG CCCGACCACC
CTCCTCGTGC AGCAGCATTA CGCGACGTTC AGTGAACGGT TCGCGAATTT TCCGGTTGTC
GTCAAGCCGG TGAGCCGTTT CAACACCTTC AAGGAGCAGG AGGAGATTCT CGCCGGCTTG
GCCGCAGGCA CGGTGGACGT CGTCATCGGT ACGCACCGTC TGTTGAGCGA CGGCGTCGTC
TTCAAGGATC TCGGCCTGGT CATCGTTGAC GAAGAGCAGC GCTTCGGCGT CGAGCACAAG
GAGCGGTTGA AGCGGCTGCG CACGAACGTC GACGTGCTGA CGATGTCCGC GACCCCCATT
CCGCGGACCC TGGAGATGGC CATCACCGGA ATCCGCGAAA TGTCGGTCAT TCAAACACCG
CCCGAAGAGC GGCATCCCGT CCTGACATTC GTCGGACCCT TCGACGAACA CCAGATCGCT
GCAGCGATTC GGCGGGAATT GCTCCGCGAG GGCCAGGTGT TCTACGTGCA CAATCGGGTG
GAAACCATCG AACAGGCCGC GGCCCGGGTC CGGGAACTGG TCCCGGAAGC CCGCGTCGCC
GTCGCCCACG GCCAGATGAA CGAAGATGCG CTCGAGCAGG TGATGATCGG ATTCTGGGAG
CGGGCGTTCG ACGTTCTGGT CTGCACCACC ATCATCGAGT CCGGCCTGGA CATTCCGAAT
GCGAATACGC TCATCGTCGA ACGGGCTGAC CTCCTTGGTC TGGGCCAGCT CTATCAACTG
CGCGGCCGGG TCGGGCGCGG CCGGGAGCGC GGTTACGCGT ATTTCTGCTA TCCCGCCGAC
CGTCCGCTCA CCGAGACGGC CCACGACCGA CTTGCCACCA TCGCCCAGCA TTCCGATTTG
GGTTCTGGAA TGTCCATTGC GATGAAGGAC CTGGAAATCC GCGGCGCCGG CAACCTCCTC
GGCGGCGAAC AATCCGGCCA TATCGCCGAG GTCGGCTTCG ATTTGTACAT GCGATTGGTT
GGTGAAGCAG TGGCCGATTT CCGCGGCGAC CAGAGCCGCG AACCCGTCGA CGTCCGGCTC
GATCTGCCGG TGGAGGCGCA CATTCCGCAC GATTACATCG ACGCCGAGCG ACTCCGGCTC
GCGACGTATC AGGCGCTGGC GGAAGCGACG TCCGATCCCG ACGTCGACGC GATCGCGGAG
GAGCTCCTCG ACCGGTACGG TCCGTTGCCG GAGCCGGTGC GGAACCTGCT CGAGGTGGCC
AAGCTCCGCG GGACATTGCG GGCGCATGGG GTCACCGAAG TTGCGTTGCA GGGCACGTAT
ATTCGTCTGG CGCCGGTGCA ATTGCGGGAT TCGCAGAAGG TGCGGCTGCA GCGGCTGTAT
CCGAAATCGA TCGTCAAGGA CGCCGTCCAG GCGATTCTCG TTCCCCGCCC GCGGGCGCAG
GACGGACGCG GTGACCTGCT CCGTGACGCA CCGCTCGTGC TCTGGGTGCG CGACCTGGTC
CAGACAGTGC TCGATGCGCC GATTTCCGCG GCCCGATAG
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| Protein sequence | MVPGVCLTGF GMDLRGLITA LLGDDGFARV RDAARKGIAN VEVGVPRPLR AFITALIAAD
APYGAGRPVL AVTATEREAT ELATALEPLL PAGAVAEYPA WETLPHERLS PRADTVGRRV
AVRRLLREQG GTLRVITTPV RALLQPQVAG LGDLEPVELR PGDEADLNDV VARLVAIGYH
RVDLVERRGE IAVRGGILDI FPPTAEHPLR VEFFGDRIEE IRPFRAGDQR SFGESADRVW
ATACRELLLT DRVVTRAAEL AQRYPQLADI LGKVAHGVVV EGMEALAPLL ADEMNLLLDE
VPSQTVVVVC DPERVRARAA DVVRTGEEFL HAAWAGAAAG GNAPIDLAAA ALRPFADIRR
HAADLGLAWW SISPLQTADA AEFRDDTGEV VIVPDAHEAP AYRGDTQALV ADVKGWLGDG
LRVAVLTAGH GSAQRIVEVL AGEDVPARWT ETIPQPPDHD LVSVSCGGLD AGFIARGAGL
VVLTETEIFG TRAAARNLGR LPSRRRKSID PLELRPGDFV VHEQHGVGRF VGMATREIGG
ATREYLVIEY APSRRGQPGD RLWVPTDSLD QVTRYVGGEA PTLDRIGGAD WARRKGRARK
AVREIAAELI QLYSARMASP GHAFGPDTPW QRELEEAFPY VETPDQLRTI EEVKADMERP
VPMDRLICGD VGYGKTEIAV RAAFKAVQDG KQVAVLCPTT LLVQQHYATF SERFANFPVV
VKPVSRFNTF KEQEEILAGL AAGTVDVVIG THRLLSDGVV FKDLGLVIVD EEQRFGVEHK
ERLKRLRTNV DVLTMSATPI PRTLEMAITG IREMSVIQTP PEERHPVLTF VGPFDEHQIA
AAIRRELLRE GQVFYVHNRV ETIEQAAARV RELVPEARVA VAHGQMNEDA LEQVMIGFWE
RAFDVLVCTT IIESGLDIPN ANTLIVERAD LLGLGQLYQL RGRVGRGRER GYAYFCYPAD
RPLTETAHDR LATIAQHSDL GSGMSIAMKD LEIRGAGNLL GGEQSGHIAE VGFDLYMRLV
GEAVADFRGD QSREPVDVRL DLPVEAHIPH DYIDAERLRL ATYQALAEAT SDPDVDAIAE
ELLDRYGPLP EPVRNLLEVA KLRGTLRAHG VTEVALQGTY IRLAPVQLRD SQKVRLQRLY
PKSIVKDAVQ AILVPRPRAQ DGRGDLLRDA PLVLWVRDLV QTVLDAPISA AR
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