Gene Acel_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1881 
Symbol 
ID4486138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2126381 
End bp2127220 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID639730671 
Productundecaprenyl pyrophosphate synthetase 
Protein accessionYP_873639 
Protein GI117929088 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGG AGAGGCGCTG CCCGCGCGTG CTCTCACTCT CCGGCGGTAG CCTGCCAAGG 
GAATTGGAGG TCGGCAACGT GGGACTCAGG CGGCTGCTCT ACGGGCTCTA CGAGCGGCGC
CTCGCCGCGA CGCTGCCACC GGACCGGATT CCGCGACACG TCGGCGTCAT CCTCGACGGC
AACCGCCGGT GGGGTCGTGC GATGGGTCTC GGCGCGTCCG GCGGCCATCG TCGCGGTGCC
GAAAAGATTG AGGAATTCCT CGGCTGGTGC GCCGACCTTC GCATCGAGGT GGTCACGCTC
TGGCTGCTGT CAACGGACAA TCTTGCTCGT CCGGCCGACG AGTTGGTGCC GTTGCTCCGC
ATCATCGAGG AGACGGTTGC CGAGTTGGCC GCGTCGCGCC GATGGCGACT CCACCCGGTA
GGCGCTCTCG ATCTGCTGCC CGACCAGACC GCACGCACCC TCAAGGAGGC GGAGCACGCC
ACGCAGGACG TCGATGGTCT GCTGGTGAAC GTGGCGGTCG GCTACGGCGG ACGCCGGGAA
ATTGCGGATG CGGTGCGGGC GCTCTTGCAC GAGCATGCGA TTCGCGGTAC CAGCATTGAG
GATTTGGCGA ACGTGTTGGA CGTCGAACAC ATTGCGCGAC ACCTCTACAC CAAGGGACAA
CCGGATCCCG ACTTGGTCAT CCGCACATCG GGAGAGCAGC GGCTCTCTGG TTTTCTCCTG
TGGCAGAGCG CACATTCTGA GTTGTTCTTC TGTGAGGCGC TCTGGCCGGA TTTTCGGCGG
GTCGATTTTC TGCGCGCGGT TCGTGCCTAC GCGCAACGTG AGCGCCGTTT TGGTGCATAA
 
Protein sequence
MGMERRCPRV LSLSGGSLPR ELEVGNVGLR RLLYGLYERR LAATLPPDRI PRHVGVILDG 
NRRWGRAMGL GASGGHRRGA EKIEEFLGWC ADLRIEVVTL WLLSTDNLAR PADELVPLLR
IIEETVAELA ASRRWRLHPV GALDLLPDQT ARTLKEAEHA TQDVDGLLVN VAVGYGGRRE
IADAVRALLH EHAIRGTSIE DLANVLDVEH IARHLYTKGQ PDPDLVIRTS GEQRLSGFLL
WQSAHSELFF CEALWPDFRR VDFLRAVRAY AQRERRFGA