| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1880 |
|---|
| Symbol | |
|---|
| ID | 4485278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 2125393 |
|---|
| End bp | 2125983 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639730670 |
|---|
| Product | secreted protein |
|---|
| Protein accession | YP_873638 |
|---|
| Protein GI | 117929087 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.953816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGAA TTTCCACGCG GCCACCCGCG GCCGTCTGCG GCTTCGCGGG AACGATGGCG
TCGCTTGCCG TGCTGGCCGC GGCCGTGAAG ATTCCGGCCA GTGCGGGCAC CGTTGCCTCG
GCCGGAGCAT CCCAGGCGGC GACCACCACC GGAACGACGG TCGCTCCTCA ACCGACGCCG
TTCATTGGAA CCTCGACGCC TTTCGTGGCA CGGAGTGTCC TCCAGCCGCC AAGCCGTTCC
GAGACCCGTC CCGCATCGCC CTCCGCCACG GCGAGTCCAG CGGTTTTACC GGAAAATCCG
CGGGATATTG CGCAGTACCT GGCTGCGCAG CGCGGTTGGA CCGGCTGGGA ATGGACATGC
CTGGATGAGC TGTGGCGTCG GGAAAGCAAT TATGAGACGA CCGCGACGAA TCCGGCGTCC
GGCGCGTACG GCATTCCGCA GGCGCTTCCC GCCGAGAAAA TGGCAAGCGC CGGACCGGAC
TGGCGTACCG ATCCGGTCAC TCAGATCACC TGGGGACTGG ACTATATTGC GAGCCGCTAC
GGTGAGCCCT GCACCGCCTG GCGGTACTGG CTGCGGGCCG GTTCGTACTA G
|
|---|
| Protein sequence | MFRISTRPPA AVCGFAGTMA SLAVLAAAVK IPASAGTVAS AGASQAATTT GTTVAPQPTP
FIGTSTPFVA RSVLQPPSRS ETRPASPSAT ASPAVLPENP RDIAQYLAAQ RGWTGWEWTC
LDELWRRESN YETTATNPAS GAYGIPQALP AEKMASAGPD WRTDPVTQIT WGLDYIASRY
GEPCTAWRYW LRAGSY
|
|---|
| |