| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1844 |
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| Symbol | dapD |
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| ID | 4485451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 2085314 |
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| End bp | 2086171 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639730634 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_873602 |
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| Protein GI | 117929051 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.788221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.084407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGACC CTTTCGTCAG CCCGTTGCCC ACCCAGATCG ATGAACTCTG GGAGCGACGC
AGCGAGCTCA ACCCTACCGA CGATCGCCCC GGCAGCCTGA GCGCCGAGGC TCGCGCGGTC
GTCAACCACG CGCTTGATCA GCTGGACGCC GGCGCGGCCC GGGTCGCATT CGTCGACCCG
AAGACCGATG CCGTCGTCGT CGACGAGCGG GCGAAGCGGG CGATTCTGCT GGCTTTCCGC
GTGTTCCCGG TTGTCGAATC GGCGGCTGGG GAGTTCCGGT ATCGCGACCG GATTCCGCTG
AAGCGCAGTT TCCCGGGGAC CCGCGTCGTC CCCGGCGCGA TCGTCCGCCA CGGCGCCTAT
GTCGCGCCGA GCGCCGTCCT CATGCCGAGT TTCGTGAACG TCGGCGGCTA TGTCGACGAG
GAGACCATGG TCGACACCTG GGCGACCGTC GGCTCATGCG CGCAGATCGG CAAGCGGGTG
CACCTGTCGG GCGGGGTGGG CATCGGCGGC GTCCTTGAAC CGCCCAGCGC GGTGCCAGTG
ATCATTGAGG ACGACGCGTT CATCGGCTCC CGGTCGATGG TGGTGGAGGG TGCGCGGGTA
CGCCGTGGCG CAAAGCTCGG CGCCGGATCG ATCCTGACCG CCTCGACCCG GGTCTTCGAC
GCCGAGACCG GCGAGGAATT GCCTCGAGGG GAAGCACCGG CGTGGTCGGT CTGCGTCGGC
TCCACCCGTG TCCGTTCCTT CCCCGGCGGG GATTTCGGGA TGCCATGCCT CCTCGTGCTC
CGCCGGCTCG CCGAAGGGGA GACCCACGAC AAACTCGCGC TGAACGACAT TCTTCGGGAC
CACGGAGTTG CCACGTGA
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| Protein sequence | MGDPFVSPLP TQIDELWERR SELNPTDDRP GSLSAEARAV VNHALDQLDA GAARVAFVDP
KTDAVVVDER AKRAILLAFR VFPVVESAAG EFRYRDRIPL KRSFPGTRVV PGAIVRHGAY
VAPSAVLMPS FVNVGGYVDE ETMVDTWATV GSCAQIGKRV HLSGGVGIGG VLEPPSAVPV
IIEDDAFIGS RSMVVEGARV RRGAKLGAGS ILTASTRVFD AETGEELPRG EAPAWSVCVG
STRVRSFPGG DFGMPCLLVL RRLAEGETHD KLALNDILRD HGVAT
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