| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1843 |
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| Symbol | |
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| ID | 4485450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 2084190 |
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| End bp | 2085317 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639730633 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_873601 |
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| Protein GI | 117929050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.230632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0555085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCG TCCTCGACCT CGGCGCCGAC GCCGGCGAAC TTGCGGCTGC GCTCGTCGAC
ATCCGGTCGG TCAGCGGGGA GGAGCAGGCG ATCGCGGACG CGGTCGAGGC GGCGCTTAGC
CGCCTCGACC ACCTTCAGGT GTACCGGTTC GGCAATGTGG TCGCGGCCCG AACCCGCGCT
GCGGGGAACG CGGCGGGACG GCGGCGCGTC GTTCTTGCCG GGCACCTGGA CACCGTGCCG
CCGGCCGACA ACTTGCCCGC GCGGCGGGAG GGCAACCTTC TGCACGGTTG CGGCGCGGTG
GACATGAAGG GCGGGCTCGC TGTCATGCTC CGGTTGGCGG CGCGGCTGGA CCAGCCCGCC
GTTGACGTGG TCTACATCTT CTATGACTGC GAGGAGGTTG AGGCGAGCCG GAACGGGTTG
GGCCGACTCG CGCGCGAACA CCCTGACCAG GTGAGCGCCG ATTTCGCCGT GCTTCTCGAA
CCATCCAATG CGACGGTCGA AGCCGGATGT CAGGGCACGA TGCGGGTTGA GATCACGTTG
CACGGCGTCC GCGCCCATAC TGCCCGTTCG TGGCTCGGGC TGAACGCGAT CCACGCGGCT
GCACCGGTGC TCCAGCGGCT CGCTGAGTAC CAGCCCCGAA CGGTAGAGAT CGACGGTTGC
GTGTACCGCG AGGGGCTCTC AGCGGTCCGC ATCGACGGTG GAGTCGCCGG CAACGTCGTC
CCCGACCGGT GCGTCGTGAC GGTCAACTAC CGGTTCGCCC CGGATCGCAC GGTGGACGAC
GCGCACGCGC ATCTGCAGGA GGTGTTCGCC GGATTCGAGC TCGCCGTCGT CGACGCGGCT
CCTGCAGCGC CGCCGAACCT GCATGCACCG GCGGTCGTGG ATTTCATCGA CACCGTCGGC
AAACCGGTCG CCGCCAAGTA CGGGTGGACG GATGTCGCCC GATTTGCGAT TCTGGGCATC
CCGGCGGTCA ATTACGGCCC GGGGGACCCT AATCTGGCGC ACCGCGGCGA CGAACAGGTC
GACGTCCGTC AGATCGCGGA GTGTGAGTCG GTCCTCGAGC GGTATCTGCT CACCGTGCCG
GGGCCTACGG GCCGGACTGC CGCAGGTCAA CCTTGGAGTG AGCGGTGA
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| Protein sequence | MTSVLDLGAD AGELAAALVD IRSVSGEEQA IADAVEAALS RLDHLQVYRF GNVVAARTRA
AGNAAGRRRV VLAGHLDTVP PADNLPARRE GNLLHGCGAV DMKGGLAVML RLAARLDQPA
VDVVYIFYDC EEVEASRNGL GRLAREHPDQ VSADFAVLLE PSNATVEAGC QGTMRVEITL
HGVRAHTARS WLGLNAIHAA APVLQRLAEY QPRTVEIDGC VYREGLSAVR IDGGVAGNVV
PDRCVVTVNY RFAPDRTVDD AHAHLQEVFA GFELAVVDAA PAAPPNLHAP AVVDFIDTVG
KPVAAKYGWT DVARFAILGI PAVNYGPGDP NLAHRGDEQV DVRQIAECES VLERYLLTVP
GPTGRTAAGQ PWSER
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