Gene Acel_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1816 
Symbol 
ID4486287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2057881 
End bp2058795 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID639730606 
Productxylose isomerase domain-containing protein 
Protein accessionYP_873574 
Protein GI117929023 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.670883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCGA TTCGGGTTGC TGCGGCGCCG GTGAGCTTCG GTGTCTTCGA GTTGACTGCG 
TCGGGGAACG GACTACCTGC CGCAGACAGT GTGCTGGATG CGGTTGTTCA GTGTGGGTAC
CAGGGAATCG ATCTTGGTCC TGCCGGCTAC CTCGGAGATC TCGACTCACT GCGTCGTCGG
CTGGCGGATC GTGAGCTTGC CTTGGCGGGT GGGTGGCTCG AAGCGCACTT CGCAGACGAT
GTGCTTCTCC AACGCGAGCT CGAGACCATC CGCGCCACGC TCGATCTCAT GGCCGCGGCC
GCTACCAACG GCGCCTGGCG TCCGAAACCG ACACTGGCGG TCACCGGAGA TGCTCGGCGG
CGGAGCGCCA TCGGACAGGC GGCGCACCGC ACCGACCTCG CGCTCGATGA GGACGGTTGG
CGGCGCCTCG TCAAGAATCT CCGCGTCGTC GTCGAGCTGT GCCGCGAGCG AAATCTCGAG
CCCACGTTCC ACCACCACCT CGGTACGTTT ATCGAGGCAC CGGAGGAAAT CGAGCGGTTG
CTCGAGGCGA CCGACGTAGG GTTGTGTCTC GATACCGGAC ATTTGCTGCT CGGGGGCGGC
GATCCGGTGA AGGCCTGGCA CGATTGGACG GATCGCATCA ACCAGATTCA CGTCAAGGAC
GCTCGTCTTG CCGTCATGCG CAGCGTCATG ACCGACGGGT GTGACATGAC GGAGGCGTGG
CGGCGAGGAA TTTTCTGTCG CCTCGGCGAC GGTGACGTCG ACCTGGATGC TTTTATCGCC
GCGGTCTCCG CAAGTGATTA CAGCGGATGG GTCGTCGTGG AGCAGGACGT CATCCCCGAT
TCGAGTACGC CGTTTGAGGC ACTCGTCGCC GACCAGCGGC GCAATCGGGA ATTTCTGCGG
GCGAGAGGTT GGTAG
 
Protein sequence
MVSIRVAAAP VSFGVFELTA SGNGLPAADS VLDAVVQCGY QGIDLGPAGY LGDLDSLRRR 
LADRELALAG GWLEAHFADD VLLQRELETI RATLDLMAAA ATNGAWRPKP TLAVTGDARR
RSAIGQAAHR TDLALDEDGW RRLVKNLRVV VELCRERNLE PTFHHHLGTF IEAPEEIERL
LEATDVGLCL DTGHLLLGGG DPVKAWHDWT DRINQIHVKD ARLAVMRSVM TDGCDMTEAW
RRGIFCRLGD GDVDLDAFIA AVSASDYSGW VVVEQDVIPD SSTPFEALVA DQRRNREFLR
ARGW