Gene Acel_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1810 
Symbol 
ID4485709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2051702 
End bp2052565 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID639730600 
Productxylose isomerase domain-containing protein 
Protein accessionYP_873568 
Protein GI117929017 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.753291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTG CGCTCGATCC GTACATGTTT CGGTCCGTTA GTCTGACCGA CCTTCCGGGC 
ATAGTGGCCG ATCTCGGCTA TGACGCCATC GAACTTTCGC CGCGGGACGA CTTCCTCCCG
TTCTTTGTTC ACCCGCGTGC AGACCGTGAC GCCATCAAGC GTTTCCGCAA GGCCCTGGCG
TCCGCCGGCG TACGGCTGGC GTCTATTCTC CCGCTCTACC GCTGGTCCGG CCCGAGTGAG
GACCAGCGCG CGGCAGCCGT CCGCTACTGG CGCCGTGCCA TCGAGATAGC CGTCGAGCTG
GAATGCCGAG TGATGAATTC CGAATTTAAC GGGCGTCCGG AGGAGCCCGA GCGCAGCGAG
GCTCAGTTCT GGCGCTCGAT GGAGGAGCTG CTGCCCGTCT TTGAGCGGGA AGGTATTCAA
CTCCGTATCG AGCCCCATCC GGATGACTTC GTGGAGGACG GACGGCGGGC GATCGACATC
ATCCGGGGCA TTAACCACCC GCTCGTCTCC TTTCTGTACT GCGCACCGCA CACCTTCCAC
ATGGGTGGCG ACATTGCAGG AATCATGCGG TACGCCGGTT CGCTCCTCAC GCACGTGCAC
GTGGCGGACT CCTTCGATCA CCGCGCATCA TCCGGTCTCC GGTACATCAT CAACCCTCCC
GGATCGCCCG CTCGAGTGCA CCAGCACCTG GATATCGGCC AGGGCGAGGT GGATTGGGAC
ACCTTCTTCG CCGAGCTCAA CCGCCTCGGC TTCGACGGAA TCATGACCGT CTGCGTTTTC
TCGTGGGAGG AACGCGCCCG CGAATCCAGC ATCTTCATGC GGGAACAGAT CCACGAATAC
CTTGCACGTT GGCATCGCTC GTGA
 
Protein sequence
MQIALDPYMF RSVSLTDLPG IVADLGYDAI ELSPRDDFLP FFVHPRADRD AIKRFRKALA 
SAGVRLASIL PLYRWSGPSE DQRAAAVRYW RRAIEIAVEL ECRVMNSEFN GRPEEPERSE
AQFWRSMEEL LPVFEREGIQ LRIEPHPDDF VEDGRRAIDI IRGINHPLVS FLYCAPHTFH
MGGDIAGIMR YAGSLLTHVH VADSFDHRAS SGLRYIINPP GSPARVHQHL DIGQGEVDWD
TFFAELNRLG FDGIMTVCVF SWEERARESS IFMREQIHEY LARWHRS