Gene Acel_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1743 
Symbol 
ID4484864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1968442 
End bp1968888 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content64% 
IMG OID639730533 
Productassimilatory nitrite reductase (NAD(P)H) small subunit 
Protein accessionYP_873501 
Protein GI117928950 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGG TTGGCACAGG CGAGCTTTCG GCGGTGCGCC GCGGTCGTTC CACATCAGAG 
AGATTGGGGT CGGCTGTGCG TGGCTGGTTT CAGATCTGTC GTTATGACGA GCTCCTGCCG
GGTCGCCCGG TGGCTGCGTG GTTGGACGGA AAGCAGGTCG CCGTGGTGCG CCTGGTCGAC
GGTACGGTGC ACGCAGTCGA CAATAAGGAT CCCTTCTGCG GCGCGAACGT TCTTGCGCGT
GGAATAACCG GCTCGCGGGG GGAGATCGAT GTGCTGATTT CTCCTATGTA CAAGCACGCG
TTTGACCTGC GGAGTGGGCG TTGTCTGGAT GACGGGTCAG TGCGCGTGTC GGTCTACGAC
GTACGGGTTC GCGAGGGTTG GGTCTGGATA CGGGCGGGAG AGCGGCGATC GTCGAGGCGC
GTCGCGGAGC GGCAATGCGA TGGGTAG
 
Protein sequence
MLQVGTGELS AVRRGRSTSE RLGSAVRGWF QICRYDELLP GRPVAAWLDG KQVAVVRLVD 
GTVHAVDNKD PFCGANVLAR GITGSRGEID VLISPMYKHA FDLRSGRCLD DGSVRVSVYD
VRVREGWVWI RAGERRSSRR VAERQCDG