Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1728 |
Symbol | smpB |
ID | 4484849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1948961 |
End bp | 1949440 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639730518 |
Product | SsrA-binding protein |
Protein accession | YP_873486 |
Protein GI | 117928935 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGGG AGAGTGGTCG CAAGCTCATC GCGAGCAACA AGAAAGCTCG GCACGACTAC CACATTGAGG ACACCTACGA GGCCGGCATC GTTCTCACCG GCACGGAGGT CAAGTCGTTG CGCGCCGGCC GCGCCTCGCT CGTGGATGGC TTCGCATTGA TCAAGGACGG GGAAGTCTGG CTGCAGAATG TGCATATCCC CGAGTACGCC GAGGGGAGCT GGACCAATCA CGAACCACGC CGGCCGCGGA AACTGCTTTT GCACAAGCGG GAAATCTTGC GCCTGCTGGG CAAGACTCGG GAGACCGGAC TGACCCTGGT GCCGCTGTCG TTGTATTTCC GGGACGGGAA GGCGAAAGTC GAACTTGCGC TGGCGCGTGG GAAGCGCGCG TACGACAAGC GGCAAGCGTT GGCGGAACGG CATGCGCAGC GGGAGATTGC GCGCGCGCTA GGGCGGCGGG TCAAGGGACA CCGCATGTGA
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Protein sequence | MARESGRKLI ASNKKARHDY HIEDTYEAGI VLTGTEVKSL RAGRASLVDG FALIKDGEVW LQNVHIPEYA EGSWTNHEPR RPRKLLLHKR EILRLLGKTR ETGLTLVPLS LYFRDGKAKV ELALARGKRA YDKRQALAER HAQREIARAL GRRVKGHRM
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