Gene Acel_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1711 
Symbol 
ID4484866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1923379 
End bp1924137 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID639730501 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_873469 
Protein GI117928918 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.890933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0516654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGG AAGGAAAAAC TGCGCTAGTC ACCGGGGCAG CGCGGGGAAT CGGACAAGCC 
TACGTGGCGC GACTGGCTGC CGACGGTGCC AACGTCGTCG CAGTCGACAT CAACGACCCG
ACCGACGGCC TGGTCGGACT CACCGGCAAG GGCGACAAGC TGGGACTGGT CTGCGACATC
AGCCGACCCG ACGAGGTGGA TGTCGTCGTC ACAACGACCC TGGAGCGGTT CGGCCGCGTC
GACATCTTGG TCAACAACGC CGGGATCTTC CCGACCGCCA GCCTAGACAC CGTGACGATC
GAGCTTTGGC GGCAGGTTCA AGCCGTCAAC GTTGAGCCGA TCCTGCGGTT CACACAGGCC
TTCGCTCCTG GAATGAAGAG CGCTGGATGG GGGCGCATCG TCAACACAGG ATCAGCTAAC
ACCCTCCTGC ATGGCAAGGA CCTGGCCTAC ATGACAAGCA AAGCCACCGT GCACGGCCTG
ACCCGGGCAC TGGCCAACGA GCTGGGCGAG AGCGGGATCA CGGTCAACGC AATCGCTCCC
AGCGTTGTCG CCACCGAAGG TTTCCTGGGG CGTGCCAGGA GCGCCGGGTC GACCGCCGAG
GAGGTACTCG CCCGAGTCTT GGCGATGCAA ACCATCAAAC GTCCTTCGGT CCCCGCTGAT
CTAGCGGACG TCCTCGGCTT CCTGGTCTCC GAAGCAGCAG GGTTTATCAC TGGTCAGATC
ATCCACGTCG ACGGCGGCCT AACCCGGACC GGAGCATGA
 
Protein sequence
MTLEGKTALV TGAARGIGQA YVARLAADGA NVVAVDINDP TDGLVGLTGK GDKLGLVCDI 
SRPDEVDVVV TTTLERFGRV DILVNNAGIF PTASLDTVTI ELWRQVQAVN VEPILRFTQA
FAPGMKSAGW GRIVNTGSAN TLLHGKDLAY MTSKATVHGL TRALANELGE SGITVNAIAP
SVVATEGFLG RARSAGSTAE EVLARVLAMQ TIKRPSVPAD LADVLGFLVS EAAGFITGQI
IHVDGGLTRT GA