Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1698 |
Symbol | |
ID | 4484698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1909242 |
End bp | 1909940 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639730488 |
Product | hypothetical protein |
Protein accession | YP_873456 |
Protein GI | 117928905 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.438132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00014053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCATGC CTGCGCTCCT GCTCACCGCC TTGCGAAGCG AAGCCGCCAT CCTGCGGACG GCGGGCCTGA CTCCGCACGT CGTCGGTGTG CGGGCGCACC GCCTCGGTGG CGAGTCCGTC CTCCGGATGG TGACGACGGC GCCCGGCACG GTCTTGCTCG TCGGGTACGC CGGTGGATTG CTTCCAGCGC AGCACCCGGG TGACGTGGTC GTCGCCACCG ACGTCCGCGA CGAACGCGGC CACGTGATCG CCACCGCACG TCCGGCGATG ATCGCCGCGG CCCTCGCCGC CTTGCGGGAC GCGGGCCTTG ACGCGACCGC GGGCAGCTTG ATCAGTGTCG GAAGGTTCGT ACGCCGCACC GCCGACCGGT ACCGTCTCGC CGCAACCGGT GCGGTGGCCG TCGACATGGA GAGCGCGCCG GTTGCGCTGG CGGCACGGCA CGCGTTGCTC GTCGTCCGGG TGCTGGTCGA CACGCCGGCT GACGGGGTCG TGACGGCCGT TGCGGGTCAC GCGTGGCGCC TGGGCCGGGT CTTGGCCCGC GCGGCACGTG CGGCGTATCA CGCCTGTGAC TGCGCGGAAT TACCGACGAG CGAAAACAGC GCGCCGTCCG GTAGCGTCGA GATGGCGACA CCGACAAGCG ACACTCGGCC GCCAGACGAC CGCCTGGCGG CGACGACGGA TCGCGGGAAG GGTAACTGA
|
Protein sequence | MTMPALLLTA LRSEAAILRT AGLTPHVVGV RAHRLGGESV LRMVTTAPGT VLLVGYAGGL LPAQHPGDVV VATDVRDERG HVIATARPAM IAAALAALRD AGLDATAGSL ISVGRFVRRT ADRYRLAATG AVAVDMESAP VALAARHALL VVRVLVDTPA DGVVTAVAGH AWRLGRVLAR AARAAYHACD CAELPTSENS APSGSVEMAT PTSDTRPPDD RLAATTDRGK GN
|
| |